Genomics|Update|Infectious Diseases ► Evolution/ Ecology/ Populations

Genomics|Update|Infectious Diseases

Volume 35  Number 6  August 5-13, 2015

Evolution/ Ecology/ Populations

Live animal markets in Minnesota: a potential source for emergence of novel influenza A viruses and interspecies transmission.
Choi MJ et al. Clin. Infect. Dis. 2015 Jul 29. (CDC Author)

Redefining the differences in gene content between Yersinia pestis and Yersinia pseudotuberculosis using large-scale comparative genomics 
Califf K, et al. Microbial Genomics, Jul 1, 2015.

Phylogenetic characterization of Central-Southern European lineage 2 West Nile virus: Analysis of human outbreaks in Italy and Greece, 2013-2014.
Barzon L et al. Clin. Microbiol. Infect. 2015 Jul 30.

Temporal trends and clonal diversity of penicillin non-susceptible pneumococci from meningitis cases from 1996 to 2012, in Salvador, Brazil.
Dos Santos MS et al. BMC Infect. Dis. 2015 302

Highly virulent non-O157 EHEC serotypes reflect a similar phylogenetic lineage, giving new insights into the evolution of EHEC.
Eichhorn I et al. Appl. Environ. Microbiol. 2015 Jul 31.

Virus isolation, genetic characterization, and seroprevalence of Toscana virus in Algeria.
Alkan C et al. Clin. Microbiol. Infect. 2015 Jul 30. 

Detection of the NS3 Q80K polymorphism by Sanger and deep sequencing in hepatitis C virus (HCV) genotype 1a strains in the United Kingdom.
Beloukas A et al. Clin. Microbiol. Infect. 2015 Jul 29.

Genomic resolution of an aggressive, widespread, diverse and expanding meningococcal serogroup B, C and W lineage.
Lucidarme J et al. J. Infect. 2015 Jul 28.

Genomic sequence of the aflatoxigenic filamentous fungus Aspergillus nomius.
Moore GG et al. BMC Genomics 2015 (1) 551

Genomic analyses of pneumococci reveal a wide diversity of bacteriocins - including pneumocyclicin, a novel circular bacteriocin.
Bogaardt C et al. BMC Genomics 2015 (1) 554

Influenza A viruses of human origin in swine, Brazil.
Nelson MI et al. Emerging Infect. Dis. 2015 Aug (8) 1339-47

Genome of emerging norovirus GII.17, United States, 2014.
Parra GI et al. Emerging Infect. Dis. 2015 Aug (8) 1477-9

Schmallenberg virus recurrence, Germany, 2014.
Wernike K et al. Emerging Infect. Dis. 2015 Jul (7) 1202-4

A globally distributed mobile genetic element inhibits natural transformation of Vibrio cholerae.
Dalia AB et al. Proc. Natl. Acad. Sci. U.S.A. 2015 Aug 3.

Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri.
Connor TR et al. Elife 2015