Volume 34 Number 1 January 8-15, 2015
Evolution, Ecology, Pathogenicity, Populations
Bacterial evolution. The type VI secretion system of Vibrio cholerae fosters horizontal gene transfer.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Borgeaud S, et al. Science 2015; 347: 63-67.
Borgeaud S, et al. Science 2015; 347: 63-67.
Comment:
RNA-seq study of cholera pathogen connects bacteria-killing mechanism to horizontal gene transfer![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Han AP. GenomeWeb, Jan 2, 2015. [by free subscription only]
RNA-seq study of cholera pathogen connects bacteria-killing mechanism to horizontal gene transfer
Han AP. GenomeWeb, Jan 2, 2015. [by free subscription only]
Phylodynamic analysis of clinical and environmental Vibrio cholerae isolates from Haiti reveals diversification driven by positive selection![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Azarian T, et al. mBio 2014; 5(6): e01824-14.
Azarian T, et al. mBio 2014; 5(6): e01824-14.
Draft whole-genome sequences of 10 serogroup O6 enterotoxigenic Escherichia coli strains![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Pattabiraman V, Bopp CA. Genome Announc 2014;2(6): pii: e01274-14.
Pattabiraman V, Bopp CA. Genome Announc 2014;2(6): pii: e01274-14.
Evolution of invasion in a diverse set of Fusobacterium species![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
McGuire AM, et al. mBio 2014; 5(6): e01864-14.
Development of a multilocus sequence typing scheme for the study of Anaplasma marginale population structure over space and time![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Guillemi EC, et al. Infect Genet Evol, Dec 27, 2014.
McGuire AM, et al. mBio 2014; 5(6): e01864-14.
Development of a multilocus sequence typing scheme for the study of Anaplasma marginale population structure over space and time
Guillemi EC, et al. Infect Genet Evol, Dec 27, 2014.
The use of genome wide association methods to investigate pathogenicity, population structure and serovar in Haemophilus parasuis![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Howell KJ, et al. BMC Genomics 2014; 15:1179.
Howell KJ, et al. BMC Genomics 2014; 15:1179.
Comparative analyses of nonpathogenic, opportunistic, and totally pathogenic mycobacteria reveal genomic and biochemical variabilities and highlight the survival attributes of Mycobacterium tuberculosis![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Rahman SA, et al. mBio 2014; 5(6): e02020-14.
Rahman SA, et al. mBio 2014; 5(6): e02020-14.
Multiple sampling and discriminatory fingerprinting reveals clonally complex and compartmentalized infections by M. bovis in cattle
Navarro Y, et al. Vet Microbiol 2015; 175(1): 99–104.
Navarro Y, et al. Vet Microbiol 2015; 175(1): 99–104.
Within-host nucleotide diversity of virus populations: Insights from next-generation sequencing![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Nelson CW, Hughes AL. Infect Genet Evol 2015; 30: 1–7.
Nelson CW, Hughes AL. Infect Genet Evol 2015; 30: 1–7.
Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Pu J, et al. Proc Natl Acad Sci USA, Dec 29, 2014.
Pu J, et al. Proc Natl Acad Sci USA, Dec 29, 2014.
Identification of the source of A (H10N8) virus causing human infection![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Xu Y, et al. Infect Genet Evol, Dec 27, 2014.
Xu Y, et al. Infect Genet Evol, Dec 27, 2014.
Contemporary avian influenza A virus subtype H1, H6, H7, H10, and H15 hemagglutinin genes encode a mammalian virulence factor similar to the 1918 pandemic virus H1 hemagglutinin![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Qi L, et al. mBio 2014; 5(6): e02116-14.
Qi L, et al. mBio 2014; 5(6): e02116-14.
Multilocus sequence typing approach for a broader range of species of Leishmania genus: describing parasite diversity in Argentina![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Marco JD. Infect Genet Evol, Dec 31, 2014.
Marco JD. Infect Genet Evol, Dec 31, 2014.
Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Neafsey DE, et al. Science 2015; 347: 1258522.
Neafsey DE, et al. Science 2015; 347: 1258522.
Comment:
Evolutionary genomics. Conundrum of jumbled mosquito genomes.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Clark AG, Messer PW. Science 2015; 347: 27-28.
Evolutionary genomics. Conundrum of jumbled mosquito genomes.
Clark AG, Messer PW. Science 2015; 347: 27-28.
Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tDi6j3k1p9CW3fwK58dJOPh4DhoUIQdEpD6QLKRpbGfeyOoCdYuNJ4Q3hIkmLykwG84cPR6CyxqinRxLL1zVRDPslVF8hxbk6iIx_2XaNoKxQ_Hl9wC8zI=s0-d)
Fontaine MC, et al. Science 2015; 347: 1258524.
Fontaine MC, et al. Science 2015; 347: 1258524.
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