Genomics|Update|Infectious Diseases ► Methods

Genomics|Update|Infectious Diseases

Volume 34  Number 6  February 12-19, 2015

Methods

Accurate, multi-kb reads resolve complex populations and detect rare microorganisms.
Sharon I, et al. Genome Res. 2015 Feb 9.

Comment:
Metagenomic sequencing with synthetic long reads illustrates vast microbial diversity
Heger M. GenomeWeb, Feb 10, 2015.

Reconstructing (super)trees from data sets with missing distances: Not all is lost.
Kettleborough G, et al. Mol Biol Evol. 2015 Feb 4.

Bayesian inference of infectious disease transmission from whole-genome sequence data
Didelot X, et al. Mol Biol Evol. 2014;31(7):1869-79.

Recombination in viruses: Mechanisms, methods of study, and evolutionary consequences.
Pérez-Losada M, et al. Infect Genet Evol. 2015 Mar;30C:296-307.

Within-host nucleotide diversity of virus populations: Insights from next-generation sequencing.
Nelson CW, Hughes AL. Infect Genet Evol. 2015 Mar;30C:1-7.

Accurate quantification of episomal HIV-1 two-long terminal repeat circles by use of optimized DNA isolation and droplet digital PCR.
Malatinkova E, et al. J Clin Microbiol. 2015 Feb;53(2):699-701.