Molecular Epidemiology and Sequencing Approaches in Public Health - Modules

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Last Posted: Sep 14, 2017

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• Making the Case for Using Whole Genome Sequencing to Fight Foodborne Illness Globally  
  S Musser et al FDA Blog, Sep 14, 2017
• Molecular Epidemiology and Sequencing Approaches in Public Health - Modules  
  New York Integrated Food Safety Center of Excellence, Cornell University
• Clinical Microbiology Laboratories' Adoption of Culture-Independent Diagnostic Tests Is a Threat to Foodborne-Disease Surveillance in the United States.  
  Shea Shari et al. Journal of clinical microbiology 2017 Jan (1) 10-19
• National Antimicrobial Resistance Monitoring System: Two Decades of Advancing Public Health Through Integrated Surveillance of Antimicrobial Resistance.  
  Karp Beth E et al. Foodborne pathogens and disease 2017 Aug
• Context Is Everything: Harmonization of Critical Food Microbiology Descriptors and Metadata for Improved Food Safety and Surveillance.  
  Griffiths Emma et al. Frontiers in microbiology 2017 1068
• A Syst-OMICS Approach to Ensuring Food Safety and Reducing the Economic Burden of Salmonellosis.  
  Emond-Rheault Jean-Guillaume et al. Frontiers in microbiology 2017 996
• Strain-level metagenomic analysis of the fermented dairy beverage nunu highlights potential food safety risks.  
  Walsh Aaron M et al. Applied and environmental microbiology 2017 Jun
• Solve Foodborne Outbreaks 
• Shiga Toxin-Producing E. coli & Food Safety 
• PulseNet International 
• PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance  
  C Nadon et al, Eurosurveillance 2.0, June 2017
• Whole genome sequencing (WGS) for food-borne pathogen surveillance and control – taking the pulse  
  J Moran-Gilad, Eurosurveillance 2.0, June 2017
• Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access.  
  Taboada Eduardo N et al. Frontiers in microbiology 2017 909
• Study of bacteria’s DNA fingerprint suggests it could be spreading via food distribution  
  Science Magazine, April 2017
• A Comparative Analysis of the Lyve-SET Phylogenomics Pipeline for Genomic Epidemiology of Foodborne Pathogens.  
  Katz Lee S et al. Frontiers in microbiology 2017 8375
• Utility of Combining Whole Genome Sequencing with Traditional Investigational Methods To Solve Foodborne Outbreaks of Salmonella Infections Associated with Chicken: A New Tool for Tackling This Challenging Food Vehicle.  
  Crowe Samuel J et al. Journal of food protection 2017 Mar 654-660

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