Genomics|Update|Infectious Diseases 2 ► Detection/ Diagnosis

Genomics|Update|Infectious Diseases

Volume 34  Number 25  June 25 - July 2, 2015

Detection/ Diagnosis

Evolutionary trajectories and diagnostic challenges of potentially zoonotic avian influenza viruses H5N1 and H9N2 co-circulating in Egypt.
Naguib MM et al. Infect. Genet. Evol. 2015 Jun 3.

Label-free identification of individual bacteria using Fourier transform light scattering 
Jo YJ, et al. Optics Express 2015; 23(12): 15792-15805. (2015)

Real-time strain typing and analysis of antibiotic resistance potential using Nanopore MinION sequencing
Cao MD, et al. bioRxiv, May 15, 2015.

Efficient detection of pathogenic leptospires using 16S ribosomal RNA.
Backstedt BT et al. PLoS ONE 2015 (6) e0128913

Bank vole prion protein as an apparently universal substrate for RT-QuIC-based detection and discrimination of prion strains.
Orrú CD et al. PLoS Pathog. 2015 Jun (6) e1004983

Recombinase polymerase amplification assay for rapid diagnostics of dengue infection.
Abd El WA et al. PLoS ONE 2015 (6) e0129682

PCR melting profile as a tool for outbreak studies of Salmonella enterica in chickens.
Zaczek A et al. BMC Vet. Res. 2015 137

Evaluation of signature erosion in Ebola virus due to genomic drift and its impact on the performance of diagnostic assays.
Sozhamannan S et al. Viruses 2015 (6) 3130-54

Detection of Zika virus in saliva.
Musso D et al. J. Clin. Virol. 2015 Jul 53-5

Development of cross-priming amplification assays for rapid and sensitive detection of Aeromonas hydrophila.
Meng S et al. Lett. Appl. Microbiol. 2015 Jun 15.

Validation and clinical application of a nested PCR for paracoccidioidomycosis diagnosis in clinical samples from Colombian patients.
Gaviria M et al. Braz J Infect Dis 2015 Jun 19.

On-chip purification and detection of hepatitis C virus RNA from human plasma.
Vaghi V et al. Biophys. Chem. 2015 Jun 11.

Comparison of double-locus sequence typing (DLST) and multilocus sequence typing (MLST) for the investigation of Pseudomonas aeruginosa populations.
Cholley P et al. Diagn. Microbiol. Infect. Dis. 2015 Aug (4) 274-7

Comparison of sample preparation methods, instrumentation platforms, and contemporary commercial databases for identification of clinically relevant mycobacteria by matrix-assisted laser desorption ionization-time of flight mass spectrometry.
Wilen CB et al. J. Clin. Microbiol. 2015 Jul (7) 2308-15

Evaluation of unbiased next-generation sequencing of RNA (RNA-seq) as a diagnostic method in influenza virus-positive respiratory samples.
Fischer N et al. J. Clin. Microbiol. 2015 Jul (7) 2238-50

Simple real-time PCR and amplicon sequencing method for identification of plasmodium species in human whole blood.
Lefterova MI et al. J. Clin. Microbiol. 2015 Jul (7) 2251-7