sábado, 9 de junio de 2018

Metagenomics AND (genetic OR genomic) AND review - PubMed - NCBI

Metagenomics AND (genetic OR genomic) AND review - PubMed - NCBI

Working in the confines of a ventilated hood, and wearing a blue-colored protective bio-hazard suite, this image depicts Centers for Disease Control (CDC) microbiologist Tatiana Travis, in the process of preparing a real-time polymerase chain reaction (PCR) test. In her right hand she holds a mechanized pipette containing a blue solution that she is pipetting into the 96-well plate held in her left hand.

From PubMed

PubMed comprises more than 27 million citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full-text content from PubMed Central and publisher web sites.


The function of our microbiota: who is out there and what do they do?
Ottman N, Smidt H, de Vos WM, Belzer C.
Front Cell Infect Microbiol. 2012 Aug 9;2:104. doi: 10.3389/fcimb.2012.00104. eCollection 2012. Review.

PMID:
 
22919693
 
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2.
Use of whole genome shotgun metagenomics: a practical guide for the microbiome-minded physician scientist.
Ma J, Prince A, Aagaard KM.
Semin Reprod Med. 2014 Jan;32(1):5-13. doi: 10.1055/s-0033-1361817. Epub 2014 Jan 3. Review.

PMID:
 
24390915
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3.
Microbiomes.
Nelson KE.
Microb Ecol. 2013 May;65(4):916-9. doi: 10.1007/s00248-013-0227-y. Epub 2013 Apr 23. Review.

PMID:
 
23604403
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4.
Sequencing pools of individuals - mining genome-wide polymorphism data without big funding.
Schlötterer C, Tobler R, Kofler R, Nolte V.
Nat Rev Genet. 2014 Nov;15(11):749-63. doi: 10.1038/nrg3803. Epub 2014 Sep 23. Review.

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25246196
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5.
Enhancing metagenomics investigations of microbial interactions with biofilm technology.
McLean RJ, Kakirde KS.
Int J Mol Sci. 2013 Nov 11;14(11):22246-57. doi: 10.3390/ijms141122246. Review.

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24284397
 
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6.
Functional metagenomics for the investigation of antibiotic resistance.
Mullany P.
Virulence. 2014 Apr 1;5(3):443-7. doi: 10.4161/viru.28196. Epub 2014 Feb 20. Review.

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7.
Metagenomics and probiotics.
Gueimonde M, Collado MC.
Clin Microbiol Infect. 2012 Jul;18 Suppl 4:32-4. doi: 10.1111/j.1469-0691.2012.03873.x. Review.

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8.
A metagenomic insight into our gut's microbiome.
Lepage P, Leclerc MC, Joossens M, Mondot S, Blottière HM, Raes J, Ehrlich D, Doré J.
Gut. 2013 Jan;62(1):146-58. doi: 10.1136/gutjnl-2011-301805. Epub 2012 Apr 23. Review.

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9.
Metagenomics and antibiotics.
Garmendia L, Hernandez A, Sanchez MB, Martinez JL.
Clin Microbiol Infect. 2012 Jul;18 Suppl 4:27-31. doi: 10.1111/j.1469-0691.2012.03868.x. Review.

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10.
Screening and expression of genes from metagenomes.
Leis B, Angelov A, Liebl W.
Adv Appl Microbiol. 2013;83:1-68. doi: 10.1016/B978-0-12-407678-5.00001-5. Review.

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23651593
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11.
Genomic and Metagenomic Approaches for Predicting Pathogen Evolution.
Casas V, Maloy S.
Microbiol Spectr. 2014 Feb;2(1):OH-0019-2013. doi: 10.1128/microbiolspec.OH-0019-2013. Review.

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12.
From cultured to uncultured genome sequences: metagenomics and modeling microbial ecosystems.
Garza DR, Dutilh BE.
Cell Mol Life Sci. 2015 Nov;72(22):4287-308. doi: 10.1007/s00018-015-2004-1. Epub 2015 Aug 9. Review.

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13.
[From molecular to genomic and metagenomic epidemiology].
Zhebrun AB.
Zh Mikrobiol Epidemiol Immunobiol. 2014 May-Jun;(3):91-100. Review. Russian.

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14.
Ecological epigenetics.
Kilvitis HJ, Alvarez M, Foust CM, Schrey AW, Robertson M, Richards CL.
Adv Exp Med Biol. 2014;781:191-210. doi: 10.1007/978-94-007-7347-9_10. Review.

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15.
Plant virus metagenomics: biodiversity and ecology.
Roossinck MJ.
Annu Rev Genet. 2012;46:359-69. doi: 10.1146/annurev-genet-110711-155600. Epub 2012 Aug 29. Review.

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16.
Sequence assembly demystified.
Nagarajan N, Pop M.
Nat Rev Genet. 2013 Mar;14(3):157-67. doi: 10.1038/nrg3367. Epub 2013 Jan 29. Review.

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Developing a metagenomic view of xenobiotic metabolism.
Haiser HJ, Turnbaugh PJ.
Pharmacol Res. 2013 Mar;69(1):21-31. doi: 10.1016/j.phrs.2012.07.009. Epub 2012 Aug 9. Review.

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18.
Mapping the inner workings of the microbiome: genomic- and metagenomic-based study of metabolism and metabolic interactions in the human microbiome.
Manor O, Levy R, Borenstein E.
Cell Metab. 2014 Nov 4;20(5):742-752. doi: 10.1016/j.cmet.2014.07.021. Epub 2014 Aug 28. Review.

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19.
Metagenomic approaches to understanding phylogenetic diversity in quorum sensing.
Kimura N.
Virulence. 2014 Apr 1;5(3):433-42. doi: 10.4161/viru.27850. Epub 2014 Feb 11. Review.

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20.
Metagenomics and future perspectives in virus discovery.
Mokili JL, Rohwer F, Dutilh BE.
Curr Opin Virol. 2012 Feb;2(1):63-77. doi: 10.1016/j.coviro.2011.12.004. Epub 2012 Jan 20. Review.

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