Public Health Genomics Knowledge Base (v1.2)
About Advanced Molecular Detection Clips
Clips are selected weekly from a variety of sources, including PubMed, journal tables of contents, and online media. Special emphasis is given to the use of next-generation genetic sequencing in infectious disease public health surveillance, investigation, and development of new diagnostics and interventions. The collection is not comprehensive but aims to capture highlights, while surveying a wide range of topics. CDC-authored articles are flagged. Items marked I&E address aspects of implementation or evaluation in clinical or public health practice.
Advanced Molecular Detection Clips Content
METHODS / TOOLS
- Ten Simple Rules for Digital Data Storage.
Hart Edmund M et al. PLoS computational biology 2016 Oct (10) e1005097
- Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition
Knudsen BE, et al. mSystems, Sep/Oct 2016.
- Emerging and Future Applications of Matrix-Assisted Laser Desorption Ionization Time-of-Flight (MALDI-TOF) Mass Spectrometry in the Clinical Microbiology Laboratory: A Report of the Association for Molecular Pathology.
Doern Christopher D et al. The Journal of molecular diagnostics : JMD 2016 Oct
- Molecular Phylogenetics: Concepts for a Newcomer.
Ajawatanawong Pravech et al. Advances in biochemical engineering/biotechnology 2016 Oct
- VSEARCH: a versatile open source tool for metagenomics.
Rognes Torbjørn et al. PeerJ 2016 e2584
- The landscape of microbial phenotypic traits and associated genes
Brbic M, et al. Nucleic Acids Res, Oct 24, 2016.
- World data centre for microorganisms: an information infrastructure to explore and utilize preserved microbial strains worldwide
Wu L, et al. Nucleic Acids Res, Oct 7, 2016.
- The Candida Genome Database (CGD): incorporation of Assembly 22, systematic identifiers and visualization of high throughput sequencing data
Skrzypek MS, et al. Nucleic Acids Res, Oct 13, 2016.
EVOLUTION / ECOLOGY / POPULATIONS
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
ANTIMICROBIALS / VACCINES / INTERVENTIONS
HOST-MICROBE INTERACTIONS
Note:
indicates that at least one CDC-affiliated author;
indicates that the article addresses aspects of implementation or evaluation in clinical or public health practice.
Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by the CDC Office of Public Health Genomics to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
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