lunes, 23 de marzo de 2015

Genomics|Resources|2015 CDC Authored Publications

Genomics|Resources|2015 CDC Authored Publications

Genomics & Health Impact Update

The Office of Public Health Genomics (OPHG) provides updated and credible information on how genomic information and family health history can improve health and influence policy and practice.

CDC-Authored Publications 2015

Prevalence of pfhrp2 and pfhrp3 gene deletions in Puerto Lempira, HondurasExternal Web Site Icon 
Abdallah JFOkoth SA, Fontecha GA, Torres RE, Banegas EI, Matute ML, Bucheli ST, Goldman IF,de Oliveira AMBarnwell JWUdhayakumar VMalar J. 2015 ;14(1):19.
Molecular Characterization of Echinococcus granulosus Sensu Lato from Farm Animals in Egypt.External Web Site Icon
Amer S, Helal IB, Kamau E, Feng Y, Xiao LPLoS One. 2015 Mar 11;10(3):e0118509.
Improving newborn screening for cystic fibrosis using next-generation sequencing technology: a technical feasibility study.External Web Site Icon
Baker MW, Atkins AE, Cordovado SKHendrix MEarley MC, Farrell PM. Genet Med. 2015 Feb 12.
Comparative Analysis of Field-Isolate and Monkey-Adapted Plasmodium vivax Genomes.External Web Site Icon
Chan ER, Barnwell JW, Zimmerman PA, Serre D. PLoS Negl Trop Dis. 2015 Mar 13;9(3):e0003566.
Genomic epidemiology of multidrug-resistant mycobacterium tuberculosis during transcontinental spread.External Web Site Icon
Coscolla M, Barry PM, Oeltmann JE, Koshinsky H, Shaw T, Cilnis M, Posey J, Rose J, Weber T, Fofanov VY, Gagneux S, Kato-Maeda M, Metcalfe JZ. J Infect Dis. 2015 Jan 18. pii: jiv025.
Innate susceptibility to norovirus infections influenced by FUT2 genotype in a United States pediatric population.External Web Site Icon
Currier RL, Payne DC, Staat MA, Selvarangan R, Shirley SH, Halasa N, Boom JA, Englund JA, Szilagyi PG, Harrison CJ, Klein EJ, Weinberg GA, Wikswo ME, Parashar U, Vinjé J, Morrow AL. Clin Infect Dis. 2015 Mar 5. pii: civ165.
Draft genome sequence of a New Delhi metallo-β-lactamase-5 (NDM-5)-producing multidrug-resistant Escherichia coli isolate.External Web Site Icon
de Man TJ, Perry KA, Avillan JJ, Rasheed JK, Limbago BM. Genome Announc. 2015 Mar 5;3(2). pii: e00017-15.
Development and Validation of an Internationally-Standardized, High-Resolution Capillary Gel-Based Electrophoresis PCR-Ribotyping Protocol for Clostridium difficile.External Web Site Icon
Fawley WN, Knetsch CW, MacCannell DR, Harmanus C, Du T, Mulvey MR, Paulick AAnderson L, Kuijper EJ, Wilcox MH. PLoS One. 2015 Feb 13;10(2):e0118150.
Subtyping Novel Zoonotic Pathogen Cryptosporidium Chipmunk Genotype I.External Web Site Icon
Guo Y, Cebelinski E, Matusevich C, Alderisio KA, Lebbad M, McEvoy J, Roellig DM, Yang C, Feng Y,Xiao L.
J Clin Microbiol. 2015 Mar 11. pii: JCM.03436-14.
Reporting incidental findings in genomic scale clinical sequencing-a clinical laboratory perspective: a report of the association for molecular pathology.External Web Site Icon
Hegde M, Bale S, Bayrak-Toydemir P, Gibson J, Bone Jeng LJ, Joseph L, Laser J, Lubin IM, Miller CE, Ross LF, Rothberg PG, Tanner AK, Vitazka P, Mao R. J Mol Diagn. 2015 Mar;17(2):107-17.
Genomic dissection of travel-associated extended-spectrum-beta-lactamase-producing Salmonella enterica serovar Typhi isolates originating from the Philippines: a one-off occurrence or a threat to effective treatment of typhoid fever?External Web Site Icon 
Hendriksen RS, Leekitcharoenphon P, Mikoleit M, Jensen JD, Kaas RS, Roer L, Joshi HB, Pornruangmong S, Pulsrikarn C, Gonzalez-Aviles GD, Reuland EA, Al Naiemi N, Wester AL, Aarestrup FM, Hasman H. J Clin Microbiol. 2015 Feb;53(2):677-80.
Epidemiological and etiological characteristics of hand, foot, and mouth disease in Henan, China, 2008-2013.External Web Site Icon
Huang X, Wei H, Wu S, Du Y, Liu L, Su J, Xu Y, Wang H, Li X, Wang Y, Liu G, Chen W, Klena JD, Xu B. Sci Rep. 2015 Mar 10;5:8904.
Prevalence of and Trends in Dyslipidemia and Blood Pressure Among US Children and Adolescents, 1999-2012.External Web Site Icon Kit BK, Kuklina E, Carroll MD, Ostchega Y, Freedman DS, Ogden CLJAMA Pediatr. 2015 Jan 19. doi: 10.1001/jamapediatrics.2014.3216.
Isolation and functional characterization of the novel Clostridium botulinum neurotoxin A8 subtypeExternal Web Site Icon
Kull S, Schulz KM, Strotmeier JW, Kirchner S, Schreiber T, Bollenbach A, Dabrowski PW, Nitsche A,Kalb SR, Dorner MB, Barr JR, Rummel A, Dorner BG. PLoS One. 2015 ;10(2):e0116381.
Microsporidia and Cryptosporidium in horses and donkeys in Algeria: Detection of a novel Cryptosporidium hominis subtype family (Ik) in a horse.External Web Site Icon
Laatamna AE, Wagnerová P, Sak B, Květoňová D, Xiao L, Rost M, McEvoy J, Saadi AR, Aissi M, Kváč M.
Vet Parasitol. 2015 Jan 19. pii: S0304-4017(15)00025-4.
Evolution of the "drivers" of translational cancer epidemiology: Analysis of funded grants and the literature.External Web Site Icon
Lam TK, Chang CQ, Rogers SD, Khoury MJ, Schully SD. Am J Epidemiol. 2015 Mar 11. pii: kwu479.
Rubella.External Web Site Icon 
Lambert N, Strebel P, Orenstein W, Icenogle J, Poland GA. Lancet. 2015 Jan 7. pii: S0140-6736(14)60539-0.
Examination of genetic variants involved in generation and biodisposition of kinins in patients with angioedemaExternal Web Site Icon
Levy J, Rivard GE, Wagner E, Beezhold D, Berlin N, Fan L, Zhang Z, Sussman GL. Allergy Asthma Clin Immunol. 2014 ;10(1):60.
Whole blood gene expression profiles distinguish clinical phenotypes of venous thromboembolism.External Web Site Icon
Lewis DA, Suchindran S, Beckman MG, Hooper WC, Grant AM, Heit JA, Manco-Johnson M, Moll S, Philipp CS, Kenney K, De Staercke C, Pyle ME, Chi JT, Ortel TL. Thromb Res. 2015 Feb 7. pii: S0049-3848(15)00058-4.
Phenotypic and phylogenetic analysis of Vibrio parahaemolyticus isolates recovered from diarrhea cases in Guangdong Province, ChinaExternal Web Site Icon 
Li B, Luo J, Tan H, Ke B, He D, Ke C, Klena JD, Zhang Y. Int J Food Microbiol. 2015 Jan 19;200c:13-17.
Identification and morphologic and molecular characterization of Cyclospora macacae n. sp. from rhesus monkeys in ChinaExternal Web Site Icon 
Li N, Ye J, Arrowood MJ, Ma J, Wang L, Xu H, Feng Y, Xiao LParasitol Res. 2015 Feb 12.
Genetic characterization of shigella flexneri isolates in Guizhou Province, China.External Web Site Icon
Li S, Sun Q, Wei X, Klena JD, Wang J, Liu Y, Tian K, Luo X, Ye C, Xu J, Wang D, Tang G. PLoS One. 2015 Jan 24;10(1):e0116708.
Prevalence and genetic characteristics of Cryptosporidium, Enterocytozoon bieneusi and Giardia duodenalis in cats and dogs in Heilongjiang province, ChinaExternal Web Site Icon
Li W, Li Y, Song M, Lu Y, Yang J, Tao W, Jiang Y, Wan Q, Zhang S, Xiao LVet Parasitol. 2015 Jan 28.
Characterization of large structural genetic mosaicism in human autosomes.External Web Site Icon
Machiela MJ, … Butler MACarreón T, …, Ruder AM, …, Chanock SJ. Am J Hum Genet. 2015 Mar 5;96(3):487-97.
Opportunities for translational epidemiology: the important role of observational studies to advance precision oncology.External Web Site Icon
Marrone M, Schilsky RL, Liu G, Khoury MJ, Freedman AN. Cancer Epidemiol Biomarkers Prev. 2015 Mar;24(3):484-9.
Mosquito biology. Evolution of sexual traits influencing vectorial capacity in anopheline mosquitoes.External Web Site Icon
Mitchell SN, Kakani EG, South A, Howell PI, Waterhouse RM, Catteruccia F. Science. 2015 Feb 27;347(6225):985-8.
Draft Genome Sequence of Legionella pneumophila D-5864, a Serogroup 6 Strain.External Web Site Icon
Morrison SS, Kozak-Muiznieks NA, Sammons S, Rowe LA, Frace M, Winchell JMGenomeAnnounc. 2015 Jan 8;3(1). pii: e01379-14. doi: 10.1128/genomeA.01379-14.
Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoesExternal Web Site Icon
Neafsey DE, … Howell PI, … Besansky NJ. Science. 2015 Jan 2;347(6217):1258522.
Whole genome detection of rotavirus mixed infections in human, porcine and bovine samples co-infected with various rotavirus strains collected from sub-Saharan Africa.External Web Site Icon
Nyaga MM, Jere KC, Esona MD, Seheri ML, Stucker KM, Halpin RA, Akopov A, Stockwell TB, Peenze I, Diop A, Ndiaye K, Boula A, Maphalala G, Berejena C, Mwenda JM, Steele AD, Wentworth DE, Mphahlele MJ.Infect Genet Evol. 2015 Feb 17. pii: S1567-1348(15)00054-4.
Molecular characterization of respiratory syncytial viruses infecting children reported to have received palivizumab immunoprophylaxis.External Web Site Icon
Oliveira DB, Iwane MK, Prill MM, Weinberg GA, Williams JV, Griffin MR, Szilagyi PG, Edwards KM, Staat MA, Hall CB, Durigon EL, Erdman DDJ Clin Virol. 2015 Apr;65:26-31.
High prevalence of "Candidatus Rickettsia andeanae" and apparent exclusion of Rickettsia parkeri in adult Amblyomma maculatum (Acari: Ixodidae) from Kansas and Oklahoma.External Web Site Icon
Paddock CD, Denison AM, Dryden MW, Noden BH, Lash RR, Abdelghani SS, Evans AE, Kelly AR, Hecht JA, Karpathy SE, Ganta RR, Little SE. Ticks Tick Borne Dis. 2015 Mar 12. pii: S1877-959X(15)00027-8.
Epidemiology and Molecular Characterization of Cryptosporidium spp. in Humans, Wild Primates, and Domesticated Animals in the Greater Gombe Ecosystem, Tanzania.External Web Site Icon
Parsons MB, Travis D, Lonsdorf EV, Lipende I, Roellig DM, Kamenya S, Zhang H, Xiao L, Gillespie TR. PLoS Negl Trop Dis. 2015 Feb 20;9(2):e0003529.
Bartonella spp. Bacteremia in blood donors from Campinas, Brazil.External Web Site Icon
Pitassi LH, de Paiva Diniz PP, Scorpio DG, Drummond MR, Lania BG, Barjas-Castro ML, Gilioli R, Colombo S, Sowy S, Breitschwerdt EB, Nicholson WL, Velho PE. PLoS Negl Trop Dis. 2015 Jan 15;9(1):e0003467.
Serotype 10A in case patients with invasive pneumococcal disease: a pilot study of PCR-based serotyping in New JerseyExternal Web Site Icon
Pitts SI, Apostolou A, DasGupta S, Delgado N, Kirn TJ, Montana B, Tan C, McHugh LA. Public Health Rep. 2015 Jan;130(1):54-9.
Prevalence of Duchenne and Becker muscular dystrophies in the United StatesExternal Web Site Icon
Romitti PA, Zhu Y, Puzhankara S, James KA, Nabukera SK, Zamba GK, Ciafaloni E, Cunniff C, Druschel CM, Mathews KD, Matthews DJ, Meaney FJ, Andrews JG, Conway KM, Fox DJ, Street NAdams MMBolen J.Pediatrics. 2015 Feb 16.
Cryptosporidium huwi n. sp. (Apicomplexa:Eimeriidae) from the guppy (Poecilia reticulata).External Web Site Icon
Ryan U, Paparini A, Tong K, Yang R, Gibson-Kueh S, O'Hara A, Lymbery A, Xiao LExp Parasitol. 2015 Jan 28. pii: S0014-4894(15)00017-X.
Leveraging biospecimen resources for discovery or validation of markers for early cancer detection.External Web Site Icon
Schully SD, Carrick DM, Mechanic LE, Srivastava S, Anderson GL, Baron JA, Berg CD, Cullen J, Diamandis EP, Doria-Rose VP, Goddard KA, Hankinson SE, Kushi LH, Larson EB, McShane LM, Schilsky RL, Shak S, Skates SJ, Urban N, Kramer BS, Khoury MJ, Ransohoff DF. J Natl Cancer Inst. 2015 Feb 16;107(4). pii: djv012. Print 2015 Apr.
Application of a 7-target pyrosequencing assay to improve the detection of neuraminidase inhibitor resistant influenza A(H3N2) virusesExternal Web Site Icon
Tamura D, Okomo-Adhiambo M, Mishin VP, Guo Z, Xu X, Villanueva J, Fry AM, Stevens J, Gubareva LVAntimicrob Agents Chemother. 2015 Feb 2.
Genetically Modifying the Insect Gut Microbiota to Control Chagas Disease Vectors through Systemic RNAi.External Web Site Icon
Taracena ML, Oliveira PL, Almendares O, Umaña C, Lowenberger C, Dotson EM, Paiva-Silva GO, Pennington PM. PLoS Negl Trop Dis. 2015 Feb 12;9(2):e0003358.
Changes in the population structure of invasive Neisseria meningitidis in the United States after quadrivalent meningococcal conjugate vaccine licensure.External Web Site Icon
Wang X, Shutt KA, Vuong JT, Cohn A, MacNeil J, Schmink S, Plikaytis B, Messonnier NE, Harrison LH, Clark TA, Mayer LWJ Infect Dis. 2015 Jan 2. pii: jiu842.
Salmonella Serotype Determination Utilizing High-throughput Genome Sequencing Data.External Web Site Icon
Zhang S, Yin Y, Jones MB, Zhang Z, Deatherage Kaiser BL, Dinsmore BA, Fitzgerald C, Fields PI, Deng X.
J Clin Microbiol. 2015 Mar 11. pii: JCM.00323-15.
Novel gentamicin resistance genes in Campylobacter isolated from humans and retail meats in the USA.External Web Site Icon
Zhao S, Mukherjee S, Chen Y, Li C, Young S, Warren M, Abbott J, Friedman S, Kabera C, Karlsson M, McDermott PF. J Antimicrob Chemother. 2015 Feb 1. pii: dkv001.

Evolutionary analysis of rubella viruses in mainland China during 2010-2012: endemic circulation of genotype 1E and introductions of genotype 2BExternal Web Site Icon 
Zhu Z, Rivailler PAbernathy E, Cui A, Zhang Y, Mao N, Xu S, Zhou S, Lei Y, Wang Y, Zheng H, He J, Chen Y, Li C, Bo F, Zhao C, Chen M, Lu P, Li F, Gu S, Gao H, Guo Y, Chen H, Feng D, Wang S, Tang X, Lei Y, Feng Y, Deng L, Gong T, Fan L, Xu W, Icenogle JSci Rep. 2015 ;5:7999.

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