domingo, 29 de mayo de 2011

Identification of an imprinted master trans regula... [Nat Genet. 2011] - PubMed result

Nat Genet. 2011 Jun;43(6):561-564. Epub 2011 May 15.
Identification of an imprinted master trans regulator at the KLF14 locus related to multiple metabolic phenotypes.
the MuTHER Consortium, Small KS, Hedman AK, Grundberg E, Nica AC, Thorleifsson G, Kong A, Thorsteindottir U, Shin SY, Richards HB; the GIANT Consortium; the MAGIC Investigators; the DIAGRAM Consortium, Soranzo N, Ahmadi KR, Lindgren CM, Stefansson K, Dermitzakis ET, Deloukas P, Spector TD, McCarthy MI.
[1] Department of Twin Research and Genetic Epidemiology, King's College London, London, UK. [2] Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK. [3].

Genome-wide association studies have identified many genetic variants associated with complex traits. However, at only a minority of loci have the molecular mechanisms mediating these associations been characterized. In parallel, whereas cis regulatory patterns of gene expression have been extensively explored, the identification of trans regulatory effects in humans has attracted less attention. Here we show that the type 2 diabetes and high-density lipoprotein cholesterol-associated cis-acting expression quantitative trait locus (eQTL) of the maternally expressed transcription factor KLF14 acts as a master trans regulator of adipose gene expression. Expression levels of genes regulated by this trans-eQTL are highly correlated with concurrently measured metabolic traits, and a subset of the trans-regulated genes harbor variants directly associated with metabolic phenotypes. This trans-eQTL network provides a mechanistic understanding of the effect of the KLF14 locus on metabolic disease risk and offers a potential model for other complex traits.

PMID:21572415[PubMed - as supplied by publisher]
Identification of an imprinted master trans regula... [Nat Genet. 2011] - PubMed result

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