Advanced Molecular Detection Clips Database|AMD Clips|PHGKB
Publication Date: Jan 17, 2019
About Advanced Molecular Detection Clips
Clips are selected weekly from a variety of sources, including PubMed, journal tables of contents, and online media. Special emphasis is given to the use of next-generation genetic sequencing in infectious disease public health surveillance, investigation, and development of new diagnostics and interventions. The collection is not comprehensive but aims to capture highlights, while surveying a wide range of topics. CDC-authored articles are flagged. Items marked I&E address aspects of implementation or evaluation in clinical or public health practice.
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Advanced Molecular Detection Clips Content
EVENTS / TRAINING / WEB RESOURCES
EVOLUTION / ECOLOGY / POPULATIONS
- Limited contribution of non-intensive chicken farming to ESBL-producing Escherichia coli colonization in humans in Vietnam: an epidemiological and genomic analysis.
Nguyen Vinh Trung et al. The Journal of antimicrobial chemotherapy 2019 Jan
- Where the plasmids roam: large-scale sequence analysis reveals plasmids with large host ranges.
Brooks Lauren Elisabeth et al. Microbial genomics 2019 Jan
- Whole genome sequencing reveals Trans-European spread of an epidemic Neisseria meningitidis serogroup W clone.
Taha Muhamed-Kheir et al. Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2019 Jan
- Complete Genome Sequences of Four Salmonella enterica Strains (Including Those of Serotypes Montevideo, Mbandaka, and Lubbock) Isolated from Peripheral Lymph Nodes of Healthy Cattle.
Bugarel Marie et al. Microbiology resource announcements 2019 Jan (2) ![Brand](https://phgkb.cdc.gov/PHGKB/images/CDC_author.jpg)
- Genome Sequences of Penicillin-Resistant Bacillus anthracis Strains.
Gargis Amy S et al. Microbiology resource announcements 2019 Jan (2) ![Brand](https://phgkb.cdc.gov/PHGKB/images/CDC_author.jpg)
- Molecular Detection and Phylogenetic Analysis of Anaplasma phagocytophilum in Horses in Korea.
Seo Min-Goo et al. The Korean journal of parasitology 2018 Dec (6) 559-565
- A cross-sectional screening by next-generation sequencing reveals Rickettsia, Coxiella, Francisella, Borrelia, Babesia, Theileria and Hemolivia species in ticks from Anatolia.
Brinkmann Annika et al. Parasites & vectors 2019 Jan (1) 26
- Longitudinal study for enterovirus A71 and coxsackievirus A16 genotype/subgenotype replacements in hand, foot and mouth disease patients in Thailand, 2000-2017.
Noisumdaeng Pirom et al. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2019 Jan
- Emergence of new genotypes and lineages of dengue viruses during the 2012-15 epidemics in southern India.
Ahamed Syed Fazil et al. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2019 Jan
- Occurrence of noroviruses in recycled water and sewage sludge: emergence of recombinant norovirus strains.
Kittigul L et al. Journal of applied microbiology 2019 Jan
- Phylogeographic analysis of human influenza A and B viruses in Myanmar, 2010-2015.
Htwe Khin Thu Zar et al. PloS one 2019 (1) e0210550
- Monkeypox virus phylogenetic similarities between a human case detected in Cameroon in 2018 and the 2017-2018 outbreak in Nigeria.
Sadeuh-Mba Serge Alain et al. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2019 Jan
- New strains of Japanese encephalitis virus circulating in Shanghai, China after a ten-year hiatus in local mosquito surveillance.
Fang Yuan et al. Parasites & vectors 2019 Jan (1) 22
- The reemergence of human rabies and emergence of an Indian subcontinent lineage in Tibet, China.
Tao Xiao-Yan et al. PLoS neglected tropical diseases 2019 Jan (1) e0007036
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
ANTIMICROBIALS / VACCINES / INTERVENTIONS
HOST-MICROBE INTERACTIONS
Note:
indicates that at least one CDC-affiliated author;
indicates that the article addresses aspects of implementation or evaluation in clinical or public health practice.
Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by the CDC Office of Public Health Genomics to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
Advanced Molecular Detection Clips Database|AMD Clips|PHGKB
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