Genomics|Resources|2012 CDC Authored Publications

Genomics|Resources|2012 CDC Authored Publications

Genomics & Health Impact Update

The Office of Public Health Genomics (OPHG) provides updated and credible information on how genomic information and family health history can improve health and influence policy and practice.

CDC-Authored Publications 2012

Genetic characterization of Cryptosporidium spp. in diarrhoeic children from four provinces in South Africa
Abu Samra N, Thompson PN, Jori F, Frean J, Poonsamy B, du Plessis D, Mogoye B, Xiao L. Zoonoses Public Health. 2012 Jun 20.
Molecular characterization of diarrheagenic Escherichia coli from Libya
Ali MM, Mohamed ZK, Klena JD, Ahmed SF, Moussa TA, Ghenghesh KS. Am J Trop Med Hyg. 2012 May;86(5):866-71.
Age-associated DNA methylation in pediatric populations
Alisch RS, Barwick BG, Chopra P, Myrick LK, Satten GA, Conneely KN, Warren ST. Genome Res. 2012 Apr;22(4):623-32.
Recommendations for publication of viral genetic data and sample access for novel viruses and strains
Arrigo NC, Briese T, Calisher CH, Drebot MA, Hjelle B, Leduc JW, Powers AM, Repik PM, Roehrig JT, Schmaljohn CS, Tesh RB, Weaver SC. Am J Trop Med Hyg. 2012 Feb;86(2):189-191.
Existence of the Rdl mutant alleles among the Anopheles malaria vector in Indonesia
Asih PB, Syahrani L, Rozi IE, Pratama NR, Marantina SS, Arsyad DS, Mangunwardoyo W, Hawley W, Laihad F, Shinta S, Sukowati S, Lobo NF, Syafruddin D. Malar J. 2012 Feb 25;11(1):57.
Looking back at genomic medicine in 2011
Auffray C, Caulfield T, Khoury MJ, Lupski JR, Schwab M, Veenstra T. Genome Med. 2012 Jan 30;4(1):9.
Single nucleotide polymorphism in the promoter region of the CD209 gene is associated with human predisposition to severe forms of tick-borne encephalitis
Barkhash AV, Perelygin AA, Babenko VN, Brinton MA, Voevoda MI. Antiviral Res. 2012 Jan;93(1):64-8.
Multistate outbreak of MDR TB identified by genotype cluster investigation
Barry PM, Gardner TJ, Funk E, Oren E, Field K, Shaw T, Langer AJ. Emerg Infect Dis. 2012 Jan;18(1):113-6.
Evaluation for West Nile Virus (WNV) RNA in urine of patients within 5 months of WNV infection
Baty SA, Gibney KB, Staples JE, Patterson AB, Levy C, Lehman J, Wadleigh T, Feld J, Lanciotti R, Nugent CT, Fischer M. J Infect Dis. 2012 May;205(9):1476-7.
Rapid, simultaneous detection of Clostridium sordellii and Clostridium perfringens in archived tissues by a novel PCR-based microsphere assay: diagnostic implications for pregnancy-associated toxic shock syndrome cases
Bhatnagar J, Deleon-Carnes M, Kellar KL, Bandyopadhyay K, Antoniadou ZA, Shieh WJ, Paddock CD, Zaki SR. Infect Dis Obstet Gynecol. 2012 ;2012:972845.
Analysis of a non-structural gene reveals evidence of possible hepatitis C virus (HCV) compartmentalization
Blackard JT, Ma G, Welge JA, Martin CM, Sherman KE, Taylor LE, Mayer KH, Jamieson DJ. J Med Virol. 2012 February;84(2):242-252.
Recommendations and proposed guidelines for assessing the cumulative evidence on joint effects of genes and environments on cancer occurrence in humans
Boffetta P, Winn DM, Ioannidis JP, Thomas DC, Little J, Davey Smith G, Cogliano VJ, Hecht SS, Seminara D, Vineis P, Khoury MJ. Int J Epidemiol. 2012 May 16.
Single cell gel electrophoresis assay (comet assay) for evaluating nanoparticles-induced DNA damage in cells
Bowman L, Castranova V, Ding M. Methods Mol Biol. 2012 ;906:415-22.
Japanese encephalitis virus genotype replacement, Taiwan, 2009-2010
Chen YY, Fan YC, Tu WC, Chang RY, Shih CC, Lu IH, Chien MS, Lee WC, Chen TH, Chang GJ, Chiou SS. Emerg Infect Dis. 2011 Dec;17(12):2354-6.
Mutation analysis of the cross-reactive epitopes of Japanese encephalitis virus envelope glycoprotein
Chiou SS, Fan YC, Crill WD, Chang RY, Chang GJ. J Gen Virol. 2012 Jun;93(Pt 6):1185-92.
Molecular signatures associated with Mx1-mediated resistance to highly pathogenic influenza virus infection: mechanisms of survival
Cilloniz C, Pantin-Jackwood MJ, Ni C, Carter VS, Korth MJ, Swayne DE, Tumpey TM, Katze MG. J Virol. 2012 Mar;86(5):2437-46.
CFTR mutation analysis and haplotype associations in CF patients
Cordovado SK, Hendrix M, Greene CN, Mochal S, Earley MC, Farrell PM, Kharrazi M, Hannon WH, Mueller PW. Mol Genet Metab. 2012 Feb;105(2):249-54.
The 3' untranslated regions of influenza genomic sequences are 5'PPP-independent ligands for RIG-I
Davis WG, Bowzard JB, Sharma SD, Wiens ME, Ranjan P, Gangappa S, Stuchlik O, Pohl J, Donis RO, Katz JM, Cameron CE, Fujita T, Sambhara S. PLoS One. 2012 ;7(3):e32661.
Severe outcomes are associated with genogroup 2 genotype 4 norovirus outbreaks: a systematic literature review
Desai R, Hembree CD, Handel A, Matthews JE, Dickey BW, McDonald S, Hall AJ, Parashar UD, Leon JS, Lopman B. Clin Infect Dis. 2012 Apr 4.
Neuraminidase H275Y and hemagglutinin D222G mutations in a fatal case of 2009 pandemic influenza A (H1N1) virus infection
Devries A, Wotton J, Lees C, Boxrud D, Uyeki T, Lynfield R. Influenza Other Respi Viruses. 2012 Jan 14.
Development of a novel genus-specific real-time PCR assay for detection and differentiation of Bartonella species and genotypes
Diaz MH, Bai Y, Malania L, Winchell JM, Kosoy MY. J Clin Microbiol. 2012 Feb 29.
Comparison of HIV-1 resistance profiles in plasma RNA versus PBMC DNA in heavily treated patients in Honduras, a resource-limited country
Diallo K, Murillo WE, de Rivera IL, Albert J, Zhou Z, Nkengasong J, Zhang G, Sabatier JF, Yang C. Int J Mol Epidemiol Genet. 2012 ;3(1):56-65.
Luciferase reporter system for studying the effect of nanoparticles on gene expression
Ding M, Bowman L, Castranova V. Methods Mol Biol. 2012 ;906:403-14.
Genetic diversity and antibiotic resistance in Shigella dysenteriae and Shigella boydii strains isolated from children aged <5 years in Egypt
El-Gendy AM, Mansour A, Weiner MA, Pimentel G, Armstrong AW, Young SY, Elsayed N, Klena JD. Epidemiol Infect. 2012 Feb;140(2):299-310.
Nocardia amikacinitolerans sp. nov., an amikacin-resistant human pathogen
Ezeoke I, Klenk HP, Potter G, Schumann P, Moser BD, Lasker BA, Nicholson A, Brown JM. Int J Syst Evol Microbiol. 2012 Jun 15.
Cancer in children with nonchromosomal birth defects
Fisher PG, Reynolds P, Von Behren J, Carmichael SL, Rasmussen SA, Shaw GM. J Pediatr. 2012 Jun;160(6):978-83.
Genomic analysis of emm59 group A Streptococcus invasive strains, United States  [PDF 221.09 KB]
Fittipaldi N, Olsen RJ, Beres SB, Van Beneden C, Musser JM. Emerg Infect Dis. 2012 ;18(4):650-652.
Assessing the influence of 5,10-methylenetetrahydrofolate reductase polymorphism on folate stability during long-term frozen storage, thawing, and repeated freeze/thawing of whole blood
Fazili Z, Sternberg MR, Pfeiffer CM. Clin Chim Acta. 2012 Jun 14;413(11-12):966-72.
Characterization of multi-drug resistant Salmonella enterica serovar Heidelberg from a ground turkey-associated outbreak in the United States, 2011
Folster JP, Pecic G, Rickert R, Taylor J, Zhao S, Fedorka-Cray PL, Whichard J, McDermott P. Antimicrob Agents Chemother. 2012 Mar 26.
Epidemic history of hepatitis C virus infection in two remote communities in Nigeria, West Africa
Forbi JC, Purdy MA, Campo DS, Vaughan G, Dimitrova ZE, Ganova-Raeva LM, Xia GL, Khudyakov YE. J Gen Virol. 2012 Mar 28.
Relevance, pathogenesis, and testing algorithm for mismatch repair-defective colorectal carcinomas: a report of the association for molecular pathology.
Funkhouser WK Jr, Lubin IM, Monzon FA, Zehnbauer BA, Evans JP, Ogino S, Nowak JA. J Mol Diagn. 2012 Mar;14(2):91-103.

Monitoring HPV type-specific prevalence over time through clinic-based surveillance: a perspective on vaccine effectiveness
Gaffga NH, Flagg EW, Weinstock HS, Shlay JC, Ghanem KG, Koutsky LA, Kerndt PR, Hsu KK, Unger ER, Datta SD. Vaccine. 2012 Jan 17.
Developmental genetics of secretory vesicle acidification during Caenorhabditis elegans spermatogenesis
Gleason EJ, Hartley PD, Henderson M, Hill-Harfe KL, Price PW, Weimer RM, Kroft TL, Zhu GD, Cordovado S, L'Hernault S W. Genetics. 2012 Jun;191(2):477-91.
Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event
Golubchik T, Brueggemann AB, Street T, Gertz RE, Spencer CC, Ho T, Giannoulatou E, Link-Gelles R, Harding RM, Beall B, Peto TE, Moore MR, Donnelly P, Crook DW, Bowden R. Nat Genet. 2012 ;44(3):352-5.
F8 gene mutation type and inhibitor development in patients with severe hemophilia A: systematic review and meta-analysis
Gouw SC, van den Berg HM, Oldenburg J, Astermark J, de Groot PG, Margaglione M, Thompson AR, van Heerde W, Boekhorst J, Miller CH, le Cessie S, van der Bom JG. Blood. 2012 Mar 22;119(12):2922-34.
Race-ethnic differences in the association of genetic loci with HbA1c levels and mortality in U.S. adults: the third National Health and Nutrition Examination Survey (NHANES III).
Grimsby JL, Porneala BC, Vassy JL, Yang Q, Florez JC, Dupuis J, Liu T, Yesupriya A, Chang MH, Ned RM, Dowling NF, Khoury MJ, Meigs JB, Magic Investigators T. BMC Med Genet. 2012 Apr 27;13(1):30.
The Jamaican historical experience of the impact of educational interventions on sickle cell disease child mortality
Grosse SD, Atrash HK, Odame I, Amendah D, Piel FB, Williams TN. Am J Prev Med. 2012 Jun;42(6):e101-3.
The association of variants in the FTO gene with longitudinal body mass index profiles in non-Hispanic white children and adolescents
Hallman DM, Friedel VC, Eissa MA, Boerwinkle E, Huber JC, Harrist RB, Srinivasan SR, Chen W, Dai S, Labarthe DR, Berenson GS. Int J Obes (Lond). 2012 Jan;36(1):61-8.
Improved analysis of C26:0-lysophosphatidylcholine in dried-blood spots via negative ion mode HPLC-ESI-MS/MS for X-linked adrenoleukodystrophy newborn screening
Haynes CA, De Jesus VR. Clin Chim Acta. 2012 Aug 16;413(15-16):1217-21.
Prenatal exposure to polycyclic aromatic hydrocarbons, benzo[a]pyrene-DNA adducts, and genomic DNA methylation in cord blood
Herbstman JB, Tang D, Zhu D, Qu L, Sjodin A, Li Z, Camann D, Perera FP. Environ Health Perspect. 2012 May;120(5):733-8.
Implications of Internet availability of genomic information for public health practice
Hesse BW, Arora NK, Khoury MJ. Public Health Genomics. 2012 ;15(3-4):201-8.
Detectable clonal mosaicism and its relationship to aging and cancer
Jacobs KB, Yeager M, Zhou W, Wacholder S, Wang Z, Rodriguez-Santiago B, Hutchinson A, Deng X, Liu C, Horner MJ, Cullen M, Epstein CG, Burdett L, Dean MC, Chatterjee N, Sampson J, Chung CC, Kovaks J, Gapstur SM, Stevens VL, Teras LT, Gaudet MM, Albanes D, Weinstein SJ, Virtamo J, Taylor PR, Freedman ND, Abnet CC, Goldstein AM, Hu N, Yu K, Yuan JM, Liao L, Ding T, Qiao YL, Gao YT, Koh WP, Xiang YB, Tang ZZ, Fan JH, Aldrich MC, Amos C, Blot WJ, Bock CH, Gillanders EM, Harris CC, Haiman CA, Henderson BE, Kolonel LN, Le Marchand L, McNeill LH, Rybicki BA, Schwartz AG, Signorello LB, Spitz MR, Wiencke JK, Wrensch M, Wu X, Zanetti KA, Ziegler RG, Figueroa JD, Garcia-Closas M, Malats N, Marenne G, Prokunina-Olsson L, Baris D, Schwenn M, Johnson A, Landi MT, Goldin L, Consonni D, Bertazzi PA, Rotunno M, Rajaraman P, Andersson U, Freeman LE, Berg CD, Buring JE, Butler MA, Carreon T, Feychting M, Ahlbom A, Gaziano JM, Giles GG, Hallmans G, Hankinson SE, Hartge P, Henriksson R, Inskip PD, Johansen C, Landgren A, McKean-Cowdin R, Michaud DS, Melin BS, Peters U, Ruder AM, et al. Nat Genet. 2012 May 6.
Evaluation of a high-throughput diagnostic system for detection of HIV-1 in dried blood spot samples from infants in Mozambique
Jani IV, Sabatier J, Vubil A, Subbarao S, Bila D, de Sousa A, Mabunda N, Garcia A, Skaggs B, Ellenberger D, Ramos A. J Clin Microbiol. 2012 Apr;50(4):1458-60.
Genetic variants in IGF-I, IGF-II, IGFBP-3, and adiponectin genes and colon cancer risk in African Americans and Whites
Keku TO, Vidal A, Oliver S, Hoyo C, Hall IJ, Omofoye O, McDoom M, Worley K, Galanko J, Sandler RS, Millikan R. Cancer Causes Control. 2012 Jul;23(7):1127-38.
Genetic and anatomic determinants of enzootic Venezuelan equine encephalitis virus infection of Culex (Melanoconion) taeniopus
Kenney JL, Adams AP, Gorchakov R, Leal G, Weaver SC. PLoS Negl Trop Dis. 2012 Apr;6(4):e1606.
Multilevel research and the challenges of implementing genomic medicine
Khoury MJ, Coates RJ, Fennell ML, Glasgow RE, Scheuner MT, Schully SD, Williams MS, Clauser SB. J Natl Cancer Inst Monogr. 2012 ;2012(44):112-20.
Increased immunogenicity of avian influenza DNA vaccine delivered to the skin using a microneedle patch
Kim YC, Song JM, Lipatov AS, Choi SO, Lee JW, Donis RO, Compans RW, Kang SM, Prausnitz MR. Eur J Pharm Biopharm. 2012 Jun;81(2):239-47.
Bartonella bacteria in nature: where does population variability end and a species start?
Kosoy M, Hayman DT, Chan KS. Infect Genet Evol. 2012 Mar 23.
Atypical Listeria monocytogenes serotype 4b strains harboring a lineage II-specific gene cassette
Lee S, Ward TJ, Graves LM, Wolf LA, Sperry K, Siletzky RM, Kathariou S. Appl Environ Microbiol. 2012 Feb;78(3):660-7.
Diversity of 16S-23S rDNA internal transcribed spacer (ITS) reveals phylogenetic relationships in Burkholderia pseudomallei and its near-neighbors
Liguori AP, Warrington SD, Ginther JL, Pearson T, Bowers J, Glass MB, Mayo M, Wuthiekanun V, Engelthaler D, Peacock SJ, Currie BJ, Wagner DM, Keim P, Tuanyok A. PLoS One. 2011 ;6(12):e29323.
Comprehensive Research Synopsis and Systematic Meta-Analyses in Parkinson's Disease Genetics: The PDGene Database.
Lill CM, Roehr JT, McQueen MB, Kavvoura FK, Bagade S, Schjeide BM, Schjeide LM, Meissner E, Zauft U, Allen NC, Liu T, Schilling M, Anderson KJ, Beecham G, Berg D, Biernacka JM, Brice A, Destefano AL, Do CB, Eriksson N, Factor SA, Farrer MJ, Foroud T, Gasser T, Hamza T, Hardy JA, Heutink P, Hill-Burns EM, Klein C, Latourelle JC, Maraganore DM, Martin ER, Martinez M, Myers RH, Nalls MA, Pankratz N, Payami H, Satake W, Scott WK, Sharma M, Singleton AB, Stefansson K, Toda T, Tung JY, Vance J, Wood NW, Zabetian CP; 23andMe, The Genetic Epidemiology of Parkinson's Disease (GEO-PD) Consortium; The International Parkinson's Disease Genomics Consortium (IPDGC); The Parkinson's Disease GWAS Consortium; The Wellcome Trust Case Control Consortium 2 (WTCCC2), Young P, Tanzi RE, Khoury MJ, Zipp F, Lehrach H, Ioannidis JP, Bertram L. PLoS Genet. 2012 Mar;8(3):e1002548.
Influence of HLA-DRB1 and HLA-DQB1 alleles on IgG antibody response to the P. vivax MSP-1, MSP-3alpha and MSP-9 in individuals from Brazilian endemic area
Lima-Junior JC, Rodrigues-da-Silva RN, Banic DM, Jiang J, Singh B, Fabricio-Silva GM, Porto LC, Meyer EV, Moreno A, Rodrigues MM, Barnwell JW, Galinski MR, de Oliveira-Ferreira J. PLoS One. 2012 ;7(5):e36419.
Trimethyltin-induced neurotoxicity: gene expression pathway analysis, q-RT-PCR and immunoblotting reveal early effects associated with hippocampal damage and gliosis
Little AR, Miller DB, Li S, Kashon ML, O'Callaghan JP. Neurotoxicol Teratol. 2012 Jan;34(1):72-82.
A new single-step PCR assay for the detection of the zoonotic malaria parasite Plasmodium knowlesi
Lucchi NW, Poorak M, Oberstaller J, Debarry J, Srinivasamoorthy G, Goldman I, Xayavong M, da Silva AJ, Peterson DS, Barnwell JW, Kissinger J, Udhayakumar V. PLoS One. 2012 ;7(2):e31848.
New insights into fluoroquinolone resistance in Mycobacterium tuberculosis: functional genetic analysis of gyrA and gyrB mutations
Malik S, Willby M, Sikes D, Tsodikov OV, Posey JE. PLoS One. 2012 ;7(6):e39754.
Pertussis pseudo-outbreak linked to specimens contaminated by Bordetella pertussis DNA from clinic surfaces
Mandal S, Tatti KM, Woods-Stout D, Cassiday PK, Faulkner AE, Griffith MM, Jackson ML, Pawloski LC, Wagner B, Barnes M, Cohn AC, Gershman KA, Messonnier NE, Clark TA, Tondella ML, Martin SW. Pediatrics. 2012 Jan 16.
Molecular epidemiology of anthrax cases associated with recreational use of animal hides and yarn in the United States
Marston CK, Allen CA, Beaudry J, Price EP, Wolken SR, Pearson T, Keim P, Hoffmaster AR. PLoS One. 2011 ;6(12):e28274.
Evaluation of blood collection filter papers for HIV-1 DNA PCR
Masciotra S, Khamadi S, Bile E, Puren A, Fonjungo P, Nguyen S, Girma M, Downing R, Ramos A, Subbarao S, Ellenberger D. J Clin Virol. 2012 Jul 7.
Concurrent serotyping and genotyping of pneumococci by use of PCR and electrospray ionization mass spectrometry
Massire C, Gertz RE, Svoboda P, Levert K, Reed MS, Pohl J, Kreft R, Li F, White N, Ranken R, Blyn LB, Ecker DJ, Sampath R, Beall B. J Clin Microbiol. 2012 Jun;50(6):2018-25.
Molecular dissection of an outbreak of carbapenem-resistant enterobacteriaceae reveals intergenus KPC carbapenemase transmission through a promiscuous plasmid
Mathers AJ, Cox HL, Kitchel B, Bonatti H, Brassinga AK, Carroll J, Scheld WM, Hazen KC, Sifri CD. mBio. 2011 ;2(6):e00204-11.
Introduction to the 4th National Conference on Genomics and Public Health
McBride CM, Bowen SM, Shully SD, Khoury MJ. Public Health Genomics. 2012 ;15(3-4):117.
Neonatal screening for lysosomal storage disorders: feasibility and incidence from a nationwide study in Austria
Mechtler TP, Stary S, Metz TF, De Jesus VR, Greber-Platzer S, Pollak A, Herkner KR, Streubel B, Kasper DC. Lancet. 2012 Jan 28;379(9813):335-41.
Evidence-based path to newborn screening for Duchenne muscular dystrophy
Mendell JR, Shilling C, Leslie ND, Flanigan KM, Al-Dahhak R, Gastier-Foster J, Kneile K, Dunn DM, Duval B, Aoyagi A, Hamil C, Mahmoud M, Roush K, Bird L, Rankin C, Lilly H, Street N, Chandrasekar R, Weiss RB. Ann Neurol. 2012 Mar;71(3):304-13.
A genome-wide association study of total bilirubin and cholelithiasis risk in sickle cell anemia
Milton JN, Sebastiani P, Solovieff N, Hartley SW, Bhatnagar P, Arking DE, Dworkis DA, Casella JF, Barron-Casella E, Bean CJ, Hooper WC, Debaun MR, Garrett ME, Soldano K, Telen MJ, Ashley-Koch A, Gladwin MT, Baldwin CT, Steinberg MH, Klings ES. PLoS One. 2012 ;7(4):e34741.
Genetic diversity of HA1 domain of hemagglutinin gene of pandemic influenza H1N1pdm09 viruses in New Delhi, India
Mir MA, Lal RB, Sullender W, Singh Y, Garten R, Krishnan A, Broor S. J Med Virol. 2012 Mar;84(3):386-93.
Use of tuberculosis genotyping for postoutbreak monitoring
Miramontes R, Winston CA, Haddad MB, Moonan PK. J Public Health Manag Pract. 2012 Jul;18(4):375-8.
Permanent genetic resources added to Molecular Ecology Resources Database 1 October 2011 - 30 November 2011
Molecular Ecology Resources Primer Development Consortium , Abreu AG, Albaina A, Alpermann TJ, Apkenas VE, Bankhead-Dronnet S, Bergek S, Berumen ML, Cho CH, Clobert J, Coulon A, D. E. Feraudy D, Estonba A, Hankeln T, Hochkirch A, Hsu TW, Huang TJ, Irigoien X, Iriondo M, Kay KM, Kinitz T, Kothera L, L. E. Henanff M, Lieutier F, Lourdais O, Macrini CM, Manzano C, Martin C, Morris VR, Nanninga G, Pardo MA, Plieske J, Pointeau S, Prestegaard T, Quack M, Richard M, Savage HM, Schwarcz KD, Shade J, Simms EL, Solferini VN, Stevens VM, Veith M, Wen MJ, Wicker F, Yost JM, Zarraonaindia I. Mol Ecol Resour. 2012 Feb 1.
Using genotyping and geospatial scanning to estimate recent Mycobacterium tuberculosis transmission, United States
Moonan PK, Ghosh S, Oeltmann JE, Kammerer JS, Cowan LS, Navin TR. Emerg Infect Dis. 2012 Mar;18(3):458-65.
Estimating the contribution of genetic variants to difference in incidence of disease between population groups
Moonesinghe R, Ioannidis JP, Flanders WD, Yang Q, Truman BI, Khoury MJ. Eur J Hum Genet. 2012 Feb 15.
Analysis of influenza viruses from patients clinically suspected of infection with an oseltamivir resistant virus during the 2009 pandemic in the United States
Nguyen HT, Trujillo AA, Sheu TG, Levine M, Mishin VP, Shaw M, Ades EW, Klimov AI, Fry AM, Gubareva LV. Antiviral Res. 2012 Mar;93(3):381-6.
HIV type 1 gag genetic diversity among antenatal clinic attendees in North Rift Valley, Kenya
Nyagaka B, Kiptoo MK, Lihana RW, Khamadi SA, Makokha EP, Kinyua JG, Mwangi J, Osman S, Lagat NJ, Muriuki J, Okoth V, Gicheru M, Ng'ang'a Z, Songok EM. AIDS Res Hum Retroviruses. 2012 May;28(5):523-6.
Differential association of gene content polymorphisms of killer cell immunoglobulin-like receptors with placental malaria in HIV- and HIV+ mothers
Omosun YO, Blackstock AJ, Gatei W, Hightower A, van Eijk AM, Ayisi J, Otieno J, Lal RB, Steketee R, Nahlen B, Ter Kuile FO, Slutsker L, Shi YP. PLoS One. 2012 ;7(6):e38617.
A real-time PCR assay for HPV52 detection and viral load quantification
Onyekwuluje JM, Steinau M, Swan DC, Unger ER. Clin Lab. 2012 ;58(1-2):61-6.
Evidence of purifying selection on merozoite surface protein 8 (MSP8) and 10 (MSP10) in Plasmodium spp
Pacheco MA, Elango AP, Rahman AA, Fisher D, Collins WE, Barnwell JW, Escalante AA. Infect Genet Evol. 2012 Jul;12(5):978-86.
A genome-wide association study of host genetic determinants of the antibody response to Anthrax Vaccine Adsorbed
Pajewski NM, Shrestha S, Quinn CP, Parker SD, Wiener H, Aissani B, McKinney BA, Poland GA, Edberg JC, Kimberly RP, Tang J, Kaslow RA. Vaccine. 2012 Jul 6;30(32):4778-84.
Utility of multiplex ligation-dependent probe amplification (mlpa) for hemophilia mutation screening
Payne A, Bean C, Hooper W, Miller C. J Thromb Haemost. 2012 Jul 3.
Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection
Peng X, Gralinski L, Ferris MT, Frieman MB, Thomas MJ, Proll S, Korth MJ, Tisoncik JR, Heise M, Luo S, Schroth GP, Tumpey TM, Li C, Kawaoka Y, Baric RS, Katze MG. mBio. 2011 ;2(6).
Rapid detection of microbial DNA by a novel isothermal genome exponential amplification reaction (GEAR) assay
Prithiviraj J, Hill V, Jothikumar N. Biochem Biophys Res Commun. 2012 Apr 20;420(4):738-42.
Evolution of the hepatitis E virus polyproline region: order from disorder
Purdy MA. J Virol. 2012 Jul 18.
Novel genetic variation identified at fixed loci in ORF62 of the Oka varicella vaccine and in a case of vaccine-associated herpes zoster
Quinlivan ML, Jensen NJ, Radford KW, Schmid DS. J Clin Microbiol. 2012 Feb 29.
Sensitive and specific detection of Trypanosoma cruzi DNA in clinical specimens using a multi-target real-time PCR approach
Qvarnstrom Y, Schijman AG, Veron V, Aznar C, Steurer F, da Silva AJ. PLoS Negl Trop Dis. 2012 Jul;6(7):e1689.
Genetic backgrounds of the Plasmodium falciparum chloroquine resistant transporter (pfcrt) alleles in Pakistan
Rawasia WF, Sridaran S, Patel JC, Abdallah J, Ghanchi NK, Barnwell JW, Escalante AA, Udhayakumar V, Beg MA. Infect Genet Evol. 2012 Mar;12(2):278-81.
Estrogen-related genes and their contribution to racial differences in breast cancer risk
Reding KW, Chen C, Lowe K, Doody DR, Carlson CS, Chen CT, Houck J, Weiss LK, Marchbanks PA, Bernstein L, Spirtas R, McDonald JA, Strom BL, Burkman RT, Simon MS, Liff JM, Daling JR, Malone KE. Cancer Causes Control. 2012 May;23(5):671-81.
Genotyping of Candida parapsilosis from three neonatal intensive care units (NICUs) using a panel of five multilocus microsatellite markers: broad genetic diversity and a cluster of related strains in one NICU
Reiss E, Lasker BA, Lott TJ, Bendel CM, Kaufman DA, Hazen KC, Wade KC, McGowan KL, Lockhart SR. Infect Genet Evol. 2012 Jul 5.
The prevalence of HLA-B27 in the US: data from the US National Health and Nutrition Examination Survey, 2009
Reveille JD, Hirsch R, Dillon CF, Carroll MD, Weisman MH. Arthritis Rheum. 2012 May;64(5):1407-11.
Comparison of DNA extraction methodologies used for assessing fungal diversity via ITS sequencing
Rittenour WR, Park JH, Cox-Ganser JM, Beezhold DH, Green BJ. J Environ Monit. 2012 Jan 9.
Trends in Population-Based Studies of Human Genetics in Infectious Diseases
Rowell J, Dowling N, Yu W, Yesupriya A, Zhang L, Gwinn M, 2012 PLoS ONE 7(2): e25431
Dried blood spot specimens are a suitable alternative sample type for HIV-1 viral load measurement and drug resistance genotyping in patients receiving first-line antiretroviral therapy
Rottinghaus EK, Ugbena R, Diallo K, Bassey O, Azeez A, Devos J, Zhang G, Aberle-Grasse J, Nkengasong J, Yang C. Clin Infect Dis. 2012 Apr;54(8):1187-95.
Re-emergence and decline of dengue virus serotype 3 in Puerto Rico
Santiago GA, McElroy-Horne K, Lennon NJ, Santiago LM, Birren BW, Henn MR, Munoz-Jordan JL. J Infect Dis. 2012 Jun 27.
No interactions between previously associated 2-hour glucose gene variants and physical activity or BMI on 2-hour glucose levels
Scott RA, Chu AY, Grarup N, Manning AK, Hivert MF, Shungin D, Tonjes A, Yesupriya A, Barnes D, Bouatia-Naji N, Glazer NL, Jackson AU, Kutalik Z, Lagou V, Marek D, Rasmussen-Torvik LJ, Stringham HM, Tanaka T, Aadahl M, Arking DE, Bergmann S, Boerwinkle E, Bonnycastle LL, Bornstein SR, Brunner E, Bumpstead SJ, Brage S, Carlson OD, Chen H, Chen YD, Chines PS, Collins FS, Couper DJ, Dennison EM, Dowling NF, et al. Diabetes. 2012 May;61(5):1291-6.
Prevalence of CGG expansions of the FMR1 gene in a US population-based sample
Seltzer MM, Baker MW, Hong J, Maenner M, Greenberg J, Mandel D. Am J Med Genet B Neuropsychiatr Genet. 2012 May 22.
Evaluation of polymerase chain reaction assays for the diagnosis of Trichomonas vaginalis infection in Russia
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