From CDC-Authored Genomics Publication Database
This database contains CDC-authored publications in public health genomics including infectious diseases, newborn screening, reproductive health, genetic testing, cancer, chronic diseases, birth defects and developmental disabilities, environmental and occupational health as well as laboratory, bioinformatics and statistical methods.
- A Population-Based Surveillance Study of Shared Genotypes of Escherichia coli Isolates from Retail Meat and Suspected Cases of Urinary Tract Infections.
Yamaji Reina et al. mSphere 2018 Aug (4) - Interlaboratory Evaluation of the U.S. Food and Drug Administration Escherichia coli Identification Microarray for Profiling Shiga Toxin-Producing Escherichia coli.
Patel Isha R et al. Journal of food protection 2018 Jul 1275-1282 - High-Quality Whole-Genome Sequences for 77 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing.
Patel Pooja N et al. Genome announcements 2018 May (19) - DNA microarray-based assessment of virulence potential of Shiga toxin gene-carrying Escherichia coli O104:H7 isolated from feedlot cattle feces.
Shridhar Pragathi B et al. PloS one 2018 (4) e0196490 - Genetic Analysis of Virulence Potential of Escherichia coli O104 Serotypes Isolated From Cattle Feces Using Whole Genome Sequencing.
Shridhar Pragathi B et al. Frontiers in microbiology 2018 9341 - Diarrheagenic Escherichia Coli and Acute Gastroenteritis in Children in Davidson County, Tennessee, United States: A Case-Control Study.
Imdad Aamer et al. The Pediatric infectious disease journal 2018 Jan - High-Quality Whole-Genome Sequences for 21 Enterotoxigenic Escherichia coli Strains Generated with PacBio Sequencing.
Smith Peyton et al. Genome announcements 2018 Jan 6(2) - Genetic Susceptibility to Hemolytic-Uremic Syndrome after Shiga Toxin-Producing Escherichia Coli (STEC) Infection: a Centers for Disease Control and Prevention (CDC) FoodNet Study.
Kallianpur Asha R et al. The Journal of infectious diseases 2017 Dec - Shiga Toxin-Producing E. coli Infections Associated with Flour.
Crowe Samuel J et al. The New England journal of medicine 2017 Nov 377(21) 2036-2043 - Draft Genome Sequences of Escherichia coli O104 Strains of Bovine and Human Origin.
Shridhar Pragathi B et al. Genome announcements 2017 Aug 5(33) - Multiplex polymerase chain reaction for identification of Escherichia coli, Escherichia albertii and Escherichia fergusonii.
Lindsey Rebecca L et al. Journal of microbiological methods 2017 Jun - High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States.
Lindsey Rebecca L et al. Genome announcements 2017 Mar (11) - Emergence of plasmid-mediated colistin resistance and New Delhi metallo-ß-lactamase genes in extensively drug-resistant Escherichia coli isolated from a patient in Thailand.
Paveenkittiporn Wantana et al. Diagnostic microbiology and infectious disease 2016 Nov - Characteristics of Clusters of Salmonella and Escherichia coli O157 Detected by Pulsed-Field Gel Electrophoresis that Predict Identification of Outbreaks.
Jones Timothy F et al. Foodborne pathogens and disease 2016 Sep - Investigation of Escherichia coli Harboring the mcr-1 Resistance Gene - Connecticut, 2016.
Vasquez Amber M et al. MMWR. Morbidity and mortality weekly report 2016 65(36) 979-80 - High-Quality Draft Genome Sequences for Five Non-O157 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing and Optical Maps.
Lindsey Rebecca L et al. Genome announcements 2016 (3) - Implementation of Whole Genome Sequencing (WGS) for Identification and Characterization of Shiga Toxin-Producing Escherichia coli (STEC) in the United States.
Lindsey Rebecca L et al. Frontiers in microbiology 2016 766 - Correction for Pattabiraman and Bopp, Draft Whole-Genome Sequences of Nine Enterotoxigenic Escherichia coli Serogroup O6 Strains.
Pattabiraman Vaishnavi et al. Genome announcements 2016 4(3) - Erratum for Pattabiraman and Bopp, Draft Whole-Genome Sequences of 10 Serogroup O6 Enterotoxigenic Escherichia coli Strains.
Pattabiraman Vaishnavi et al. Genome announcements 2016 4(3) - Multiple-locus variable-number tandem repeat analysis for strain discrimination of non-O157 Shiga toxin-producing Escherichia coli.
Timmons Chris et al. Journal of microbiological methods 2016 Apr - Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25.
Lindsey Rebecca L et al. Genome announcements 2015 3(6) - Enteropathogenic and enteroaggregative E. coli in stools of children with acute gastroenteritis in Davidson County, Tennessee.
Foster Monique A et al. Diagnostic microbiology and infectious disease 2015 Nov (3) 319-24 - Canonical Single Nucleotide Polymorphisms (SNPs) for High-Resolution Subtyping of Shiga-Toxin Producing Escherichia coli (STEC) O157:H7.
Griffing Sean M et al. PLoS ONE 2015 (7) e0131967 - Draft Whole-Genome Sequences of 10 Enterotoxigenic Escherichia coli Serogroup O6 Strains.
Pattabiraman Vaishnavi et al. Genome Announc 2015 3(3) - Comparison of whole genome sequences from human and non-human Escherichia coli O26 strains.
Norman Keri N et al. Front Cell Infect Microbiol 2015 521 - Draft Genome Sequence of a New Delhi Metallo-ß-Lactamase-5 (NDM-5)-Producing Multidrug-Resistant Escherichia coli Isolate.
de Man Tom J B et al. Genome Announc 2015 (2) - Evaluating the occurrence of Escherichia albertii in chicken carcass rinses by PCR, Vitek analysis, and sequencing of the rpoB gene.
Lindsey Rebecca L et al. Appl. Environ. Microbiol. 2015 Mar 81(5) 1727-34 - Draft Whole-Genome Sequences of 10 Serogroup O6 Enterotoxigenic Escherichia coli Strains.
Pattabiraman Vaishnavi et al. Genome Announc 2014 2(6) - Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli Isolates and 12 Isolates Representing Other Diarrheagenic E. coli Pathotypes.
Trees Eija et al. Genome Announc 2014 2(4) - Draft Whole-Genome Sequences of Nine Non-O157 Shiga Toxin-Producing Escherichia coli Strains.
Lindsey Rebecca L et al. Genome Announc 2014 2(4) - Draft Genome Sequences of Nine Enteropathogenic Escherichia coli Strains from Kenya.
Hazen Tracy H et al. Genome Announc 2014 2(3) - Visual endpoint detection of Escherichia coli O157:H7 using isothermal Genome Exponential Amplification Reaction (GEAR) assay and malachite green.
Jothikumar Prithiviraj et al. J. Microbiol. Methods 2014 Mar 98122-7 - Genotypes and virulence characteristics of Shiga toxin-producing Escherichia coli O104 strains from different origins and sources.
Miko Angelika et al. Int. J. Med. Microbiol. 2013 Dec 303(8) 410-21 - Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2.
Ahmed Sanaa A et al. PLoS ONE 2012 7(11) e48228 - Genotypic characterization of Streptococcus infantarius subsp. coli isolates from sea otters with infective endocarditis and/or septicemia and from environmental mussel samples.
Counihan-Edgar Katrina L et al. J. Clin. Microbiol. 2012 Dec 50(12) 4131-3 - Association of nucleotide polymorphisms within the O-antigen gene cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with serogroups and genetic subtypes.
Norman Keri N et al. Appl. Environ. Microbiol. 2012 Sep 78(18) 6689-703 - Molecular characterization of diarrheagenic Escherichia coli from Libya.
Ali Mostafa Mohamed M et al. Am. J. Trop. Med. Hyg. 2012 May 86(5) 866-71 - Rapid detection of microbial DNA by a novel isothermal genome exponential amplification reaction (GEAR) assay.
Prithiviraj Jothikumar et al. Biochem. Biophys. Res. Commun. 2012 Apr 20. 420(4) 738-42 - Experiences from the Shiga toxin-producing Escherichia coli O104:H4 outbreak in Germany and research needs in the field, Berlin, 28-29 November 2011.
et al. Euro Surveill. 2012 17(7)
.png)
No hay comentarios:
Publicar un comentario