Genomics|Update|Infectious Diseases ► Evolution, Ecology, Pathogenicity, Populations

Genomics|Update|Infectious Diseases

Volume 34  Number 21  May 28 - June 4, 2015

Evolution, Ecology, Pathogenicity, Populations

Evolutionary trajectories of two distinct avian influenza epidemics: Parallelisms and divergences.

Fusaro A et al. Infect. Genet. Evol. 2015 May 20.

Population structure of Legionella spp. from environmental samples in Gabon, 2013.

Ehrhardt J et al. Infect. Genet. Evol. 2015 May 19.

The complete mitochondrial genome of Pseudoterranova azarasi and comparative analysis with other anisakid nematodes.

Liu Shan-Shan et al. Infect. Genet. Evol. 2015 May 18.

Impact of HBV genotypes A and D genetic variability on infection evolution.

Urone N et al. Infect. Genet. Evol. 2015 May 16.

Genetic diversity and recombination within bufaviruses: Detection of a novel strain in Hungarian bats.

Kemenesi G et al. Infect. Genet. Evol. 2015 May 16.

A novel baseline hepatitis B virus sequencing-based strategy for predicting adefovir antiviral response.

Wang Yu-Wei et al. Infect. Genet. Evol. 2015 May 14. AR

Impact of spatial dispersion, evolution, and selection on Ebola Zaire Virus epidemic waves.

Azarian Taj et al. Sci Rep 2015 10170

Reliable timescale inference of HBV genotype A origin and phylodynamics.

Zehender Gi et al. Infect. Genet. Evol. 2015 Jun 361-9

Genome sequence analysis of Ebola virus in clinical samples from three British healthcare workers, August 2014 to March 2015

Bell A, et al. Eurosurveillance, Volume 20, Issue 20, 21 May 2015.

Genetic diversity of highly pathogenic H5N8 avian influenza viruses at a single overwintering site of migratory birds in Japan, 2014/15

Ozawa M, et al. Eurosurveillance, Volume 20, Issue 20, 21 May 2015.

Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing.

Agoti CN et al. J. Virol. 2015 Apr (7) 3444-54

Filovirus RefSeq entries: evaluation and selection of filovirus type variants, type sequences, and names.

Kuhn JH et al. Viruses 2014 Sep (9) 3663-82 (CDC Author)

Molecular characterization of quinolone resistance mechanisms and extended-spectrum ß-lactamase production in Escherichia coli isolated from dogs.

Meireles D et al. Comp. Immunol. Microbiol. Infect. Dis. 2015 May 12.

Variability of HIV-1 in the female genital reservoir during genital reactivation of herpes simplex virus type 2 (HSV-2).

LeGoff Jérôme et al. Clin. Microbiol. Infect. 2015 May 20.

Prevalence of Stx-producing Shigella species isolated from French Travelers Returning from the Caribbean: An emerging pathogen with international implications.

Gray MD et al. Clin. Microbiol. Infect. 2015 May 13.

Transcriptomic analysis of colistin-susceptible and colistin-resistant isolates identifies genes associated with colistin resistance in Acinetobacter baumannii.

Park Young K et al. Clin. Microbiol. Infect. 2015 Apr 22.

Striking divergence in toxoplasma ROP16 nucleotide sequences from human and meat samples.

Alvarez C et al. J. Infect. Dis. 2015 Jun 15. (12) 2006-13

Changes in the population structure of invasive Neisseria meningitidis in the United States after Quadrivalent Meningococcal Conjugate vaccine licensure.

Wang Xin et al. J. Infect. Dis. 2015 Jun 15. (12) 1887-94 (CDC Author)

Genetic dissection of complete genomes of Type 2 PRRS viruses isolated in Denmark over a period of 15 years.

Kvisgaard LK et al. Vet. Microbiol. 2013 Dec 27. (3-4) 334-44

Nomenclature updates resulting from the evolution of avian influenza A(H5) virus clades 2.1.3.2a, 2.2.1, and 2.3.4 during 2013-2014.

Donis RO et al. Influenza Other Respir Viruses 2015 May 12. (CDC Author)

Rotavirus group A genotypes detected through diarrheal disease surveillance in Haiti, 2012.

Esona MD et al. Am. J. Trop. Med. Hyg. 2015 May 11. (CDC Author)

Variation in Plasmodium falciparum histidine-rich protein 2 (Pfhrp2) and Plasmodium falciparum histidine-rich protein 3 (Pfhrp3) gene deletions in Guyana and Suriname

Okoth SA, et al. PLoS ONE 2015; 10(5): e0126805. (CDC Author)

Haemagglutinin mutations and glycosylation changes shaped the 2012/13 influenza A(H3N2) epidemic, Houston, Texas.

Stucker KM et al. Euro Surveill. 2015 (18) (CDC Author)

Genomics|Update|Infectious Diseases