Genomics & Health Impact Update
The Office of Public Health Genomics (OPHG) provides updated and credible information on how genomic information and family health history can improve health and influence policy and practice.
CDC-Authored Publications 2013
Analysis of whole genome sequences of 16 strains of rubella virus from the United States, 1961-2009
Abernathy E, Chen MH, Bera J, Shrivastava S, Kirkness E, Zheng Q, Bellini W, Icenogle J. Virol J. 2013 ;10:32.
Proportion of neural tube defects attributable to known risk factors
Agopian AJ, Tinker SC, Lupo PJ, Canfield MA, Mitchell LE.
Birth Defects Res A Clin Mol Teratol. 2013 January;97(1):42-46.
Antibody- and genome-based identification of recent HCV infection
Araujo AC.
Antivir Ther. 2012 ;17(7 Pt B):1459-64.
Prevalence and healthcare actions of women in a large health system with a family history meeting the 2005 USPSTF recommendation for BRCA genetic counseling referral
Bellcross CA, Leadbetter S, Alford SH, Peipins LA. Cancer Epidemiol Biomarkers Prev. 2013 Apr;22(4):728-35.
CTNNA3 (alpha-catenin) gene variants are associated with diisocyanate asthma: a replication study in a caucasian worker population
Bernstein DI, Kashon M, Lummus ZL, Johnson VJ, Fluharty K, Gautrin D, Malo JL, Cartier A, Boulet LP, Sastre J, Quirce S, Germolec D, Tarlo SM, Cruz MJ, Munoz X, Luster MI, Yucesoy B. Toxicol Sci. 2012 Jan;131(1):242-6.
Localization of pandemic 2009 H1N1 influenza A virus RNA in lung and lymph nodes of fatal influenza cases by in situ hybridization: new insights on virus replication and pathogenesis
Bhatnagar J, Jones T, Blau DM, Shieh WJ, Paddock CD, Drew C, Denison AM, Rollin DC, Patel M, Zaki SR. J Clin Virol. 2012 Dec 13.
RIG-I goes beyond naked recognition
Bowzard JB, Ranjan P, Sambhara S. Cell Host Microbe. 2013 Mar 13;13(3):247-9.
KPC-4 is encoded within a truncated Tn4401 in an IncL/M plasmid, pNE1280, isolated from Enterobacter cloacae and Serratia marcescens
Bryant KA, Van Schooneveld TC, Thapa I, Bastola D, Williams LO, Safranek TJ, Hinrichs SH, Rupp ME, Fey PD Antimicrob Agents Chemother. 2013 Jan;57(1):37-41.
Opportunities for Public Health Communication, Intervention, and Future Research on Breast Cancer in Younger Women.
Buchanan N, Roland KB, Rodriguez JL, Miller JW, Fairley T. J Womens Health (Larchmt). 2013 Mar 20
Susceptibility to repeated, low-dose, rectal SHIVSF162P3 challenge is independent of TRIM5 genotype in rhesus macaques
Butler K, Morgan JS, Hanson DL, Adams DR, Garcia-Lerma G, Heneine PW, Ellenberger D, Hendry RM, McNicholl JM, Johnson W, Kersh EN. AIDS Res Hum Retroviruses. 2013 Mar 5.
Molecular evolution of viruses of the family Filoviridae based on 97 whole-genome sequences
Carroll SA, Towner JS, Sealy TK, McMullan LK, Khristova ML, Burt FJ, Swanepoel R, Rollin PE, Nichol ST. J Virol. 2013 Mar;87(5):2608-16.
Detection of the A2058G and A2059G 23S rRNA gene point mutations associated with azithromycin resistance in Treponema pallidum by use of a TaqMan real-time multiplex PCR assay
Chen CY, Chi KH, Pillay A, Nachamkin E, Su JR, Ballard RC. J Clin Microbiol. 2013 Mar;51(3):908-13.
MtrR control of a transcriptional regulatory pathway in Neisseria meningitidis that influences expression of a gene (nadA) encoding a vaccine candidate
Cloward JM, Shafer WM. PLoS One. 2013 ;8(2):e56097.
Rapid hepatitis C virus divergence among chronically infected individuals
Cruz-Rivera M, Carpio-Pedroza JC, Escobar-Gutierrez A, Lozano D, Vergara-Castaneda A, Rivera-Osorio P, Martinez-Guarneros A, Chacon CA, Fonseca-Coronado S, Vaughan G. J Clin Microbiol. 2013 Feb;51(2):629-32.
Genotypic characterization of Egypt enterotoxigenic Escherichia coli isolates expressing coli surface antigen 6
El-Gendy AM, Mansour A, Shaheen HI, Monteville MR, Armstrong AW, El-Sayed N, Young SY, Klena JD. J Infect Dev Ctries. 2013 ;7(2):90-100.
The arrival of genomic medicine to the clinic is only the beginning of the journey
Evans JP, Khoury MJ. Genet Med. 2013 Apr;15(4):268-9.
CrcZ and CrcX regulate carbon source utilization in Pseudomonas syringae pathovar tomato strain DC3000
Filiatrault MJ, Stodghill PV, Wilson J, Butcher BG, Chen H, Myers CR, Cartinhour SW. RNA Biol. 2013 Jan 25;10(2).
Application of mass spectrometry to molecular surveillance of hepatitis B and C viral infections
Ganova-Raeva LM, Dimitrova ZE, Campo DS, Khudyakov Y.
Antivir Ther. 2012 ;17(7 Pt B):1477-82.
Detection of hepatitis C virus transmission using DNA mass spectrometry
Ganova-Raeva LM, Dimitrova ZE, Campo DS, Yulin L, Ramachandran S, Xia GL, Honisch C, Cantor CR, Khudyakov YE. J Infect Dis. 2013 Jan 8.
Comparative Effectiveness Research in Cancer: What Has Been Funded and What Knowledge Gaps Remain?
Glasgow RE, Doria-Rose VP, Khoury MJ, Elzarrad M, Brown ML, Stange KC. J Natl Cancer Inst. 2013 Apr 11.
Historical shifts in Brazilian P. falciparum population structure and drug resistance alleles
Griffing SM, Viana GM, Mixson-Hayden T, Sridaran S, Alam MT, de Oliveira AM, Barnwell JW, Escalante AA, Povoa MM, Udhayakumar V. PLoS One. 2013 ;8(3):e58984.
Modeling uncertain outcomes of genetic testing: factor V Leiden mutation and pregnant women
Grosse SD, Caughey AB. Genet Med. 2013 Feb 28.
Recent advances in research of HIV infection: implications of viral and host genetics on treatment and prevention
Haaland RE, Johnson JA, Tang J. Public Health Genomics. 2013 ;16(1-2):31-6.
Preconception folic acid supplementation and risk for chromosome 21 nondisjunction: a report from the National Down Syndrome Project
Hollis ND, Allen EG, Oliver TR, Tinker SW, Druschel C, Hobbs CA, O'Leary LA, Romitti PA, Royle MH, Torfs CP, Freeman SB, Sherman SL, Bean LJ. Am J Med Genet A. 2013 Mar;161(3):438-44.
Genetic modification of the association between peripubertal dioxin exposure and pubertal onset in a cohort of Russian boys
Humblet O, Korrick SA, Williams PL, Sergeyev O, Emond C, Birnbaum LS, Burns JS, Altshul LM, Patterson Jr DG, Turner WE, Lee MM, Revich B, Hauser R. Environ Health Perspect. 2013 Jan;121(1):111-117.
Field evaluation of a broadly sensitive HIV-1 in-house genotyping assay for use with both plasma and dried blood spot specimens in a resource-limited country
Inzaule S, Yang C, Kasembeli A, Nafisa L, Okonji J, Oyaro B, Lando R, Mills LA, Laserson K, Thomas T, Nkengasong J, Zeh C. J Clin Microbiol. 2013 Feb;51(2):529-39.
Are randomized trials obsolete or more important than ever in the genomic era?
Ioannidis, John PA and Muin J Khoury Genome Medicine 2013, 5:32 Apr 18
Knowledge integration in cancer: current landscape and future prospects
Ioannidis JP, Schully SD, Lam TK, Khoury MJ. Cancer Epidemiol Biomarkers Prev. 2013 Jan;22(1):3-10.
Association between immunoglobulin GM and KM genotypes and placental malaria in HIV-1 negative and positive women in western Kenya
Iriemenam NC, Pandey JP, Williamson J, Blackstock AJ, Yesupriya A, Namboodiri AM, Rocca KM, van Eijk AM, Ayisi J, Oteino J, Lal RB, Ter Kuile FO, Steketee R, Nahlen B, Slutsker L, Shi YP.
PLoS One. 2013 ;8(1):e53948.
Detailed molecular epidemiologic characterization of HIV-1 infection in Bulgaria reveals broad diversity and evolving phylodynamics
Ivanov IA, Beshkov D, Shankar A, Hanson DL, Paraskevis D, Georgieva V, Karamacheva L, Taskov H, Varleva T, Elenkov I, Stoicheva M, Nikolova D, Switzer WM. PLoS One. 2013 ;8(3):e59666.
Genomics and autism spectrum disorder
Johnson NL, Giarelli E, Lewis C, Rice CE. J Nurs Scholarsh. 2013 Jan 31.
Using a state cancer registry to recruit young breast cancer survivors and high-risk relatives: protocol of a randomized trial testing the efficacy of a targeted versus a tailored intervention to increase breast cancer screening
Katapodi MC, Northouse LL, Schafenacker AM, Duquette D, Duffy SA, Ronis DL, Anderson B, Janz NK, McLosky J, Milliron KJ, Merajver SD, Duong LM, Copeland G. BMC Cancer. 2013 ;13:97.
Development of a genomic DNA reference material Panel for Myotonic Dystrophy Type 1 (DM1) genetic testing
Kalman L, Tarleton J, Hitch M, Hegde M, Hjelm N, Berry-Kravis E, Zhou L, Hilbert JE, Luebbe EA, Moxley RT 3rd, Toji L.. J Mol Diagn 2013 May
Use of whole genome sequencing to determine the microevolution of mycobacterium tuberculosis during an outbreak
Kato-Maeda M, Ho C, Passarelli B, Banaei N, Grinsdale J, Flores L, Anderson J, Murray M, Rose G, Kawamura LM, Pourmand N, Tariq MA, Gagneux S, Hopewell PC. PLoS One. 2013 ;8(3):e58235.
The Francisella tularensis FabI enoyl-acyl carrier protein reductase gene is essential to bacterial viability and is expressed during infection
Kingry LC, Cummings JE, Brookman KW, Bommineni GR, Tonge PJ, Slayden RA. J Bacteriol. 2013 Jan;195(2):351-8
Molecular surveillance of hepatitis C
Khudyakov Y.
Antivir Ther. 2012 ;17(7 Pt B):1465-70.
How can polygenic inheritance be used in population screening for common diseases?
Khoury MJ, Janssens AC, Ransohoff DF. Genet Med. 2013 Feb 14.
Transforming epidemiology for 21st century medicine and public health
Khoury MJ, Lam TK, Ioannidis JP, Hartge P, Spitz MR, Buring JE, Chanock SJ, Croyle R, Goddard KA, Ginsburg GS, Herceg Z, Hiatt RA, Hoover RN, Hunter DJ, Kramer BS, Lauer MS, Meyerhardt JA, Olopade OI, Palmer JR, Sellers TA, Seminara D, Ransohoff DF, Rebbeck TR, Tourassi G, Zauber AG, Winn DM, Schully SD. Cancer Epidemiol Biomarkers Prev. 2013 Mar 5.
Relationships between selected gene polymorphisms and blood pressure sensitivity to weight loss in elderly persons with hypertension
Kostis WJ, Cabrera J, Hooper WC, Whelton PK, Espeland MA, Cosgrove NM, Cheng JQ, Deng Y, De Staerck C, Pyle M, Maruthur N, Reyes I, Anderson CA, Liu J, Kostis JB. Hypertension. 2013 Apr;61(4):857-63.
Provocative questions in cancer epidemiology in a time of scientific innovation and budgetary constraints
Lam TK, Sheri D. Schully, Scott Rogers, Rachel Benkeser, Britt C. Reid, and Muin J. Khoury Cancer Epidemiology Biomarkers and Prevention
Epistatic connectivity among HCV genomic sites as a genetic marker of interferon resistance
Lara J, Khudyakov Y.
Antivir Ther. 2012 ;17(7 Pt B):1471-5.
Multilocus sequence typing of Enterocytozoon bieneusi: lack of geographic segregation and existence of genetically isolated sub-populations
Li W, Cama V, Akinbo FO, Ganguly S, Kiulia NM, Zhang X, Xiao L. Infect Genet Evol. 2012 Dec 17.
Impact of minority nonnucleoside reverse transcriptase inhibitor resistance mutations on resistance genotype after virologic failure
Li JZ, Paredes R, Ribaudo HJ, Kozal MJ, Svarovskaia ES, Johnson JA, Geretti AM, Metzner KJ, Jakobsen MR, Hullsiek KH, Ostergaard L, Miller MD, Kuritzkes DR. J Infect Dis. 2013 Mar;207(6):893-7.
Prioritizing tuberculosis clusters by genotype for public health action, Washington, USA
Lindquist S, Allen S, Field K, Ghosh S, Haddad MB, Narita M, Oren E.
Emerg Infect Dis. 2013 ;19(3):493-495.
Malaria diagnostics and surveillance in the post-genomic era
Lucchi NW, Oberstaller J, Kissinger JC, Udhayakumar V. Public Health Genomics. 2013 ;16(1-2):37-43.
Molecular evolution of lineage 2 West Nile virus
McMullen AR, Albayrak H, May FJ, Davis CT, Beasley DW, Barrett AD. J Gen Virol. 2013 Feb;94(Pt 2):318-25.
Genetic relatedness of dengue viruses in Key West, Florida, USA, 2009-2010
Munoz-Jordan JL, Santiago GA, Margolis H, Stark L. Emerg Infect Dis. 2013 ;19(4):652-654.
Reproductive patterns among mothers of males diagnosed with Duchenne or Becker muscular dystrophy
Nabukera SK, Romitti PA, Caspers KM, Street N, Cunniff C, Mathews KD, Fox DJ, Puzhankara S, Ciafaloni E, James KA, Su Y. Am J Med Genet A. 2013 Jan;161(1):70-75.
Comparative effectiveness research in cancer genomics and precision medicine: Current landscape and future prospects
Naoko I. Simonds, Muin J. Khoury, Sheri D. Schully, Katrina Armstrong, Wendy F. Cohn, David A. Fenstermacher, Geoffrey S. Ginsburg, Katrina A.B. Goddard, William A. Knaus, Gary H. Lyman, Scott D. Ramsey, Jianfeng Xu and Andrew N. Freedman, JNCI, May 9
Borrelia burgdorferi bba66 gene inactivation results in attenuated mouse infection by tick transmission
Patton TG, Brandt KS, Nolder C, Clifton DR, Carroll JA, Gilmore RD. Infect Immun. 2013 Apr 29.
A nuclear single-nucleotide polymorphism (SNP) potentially useful for the separation of Rhodnius prolixus from members of the Rhodnius robustus cryptic species complex (Hemiptera: Reduviidae)
Pavan MG, Mesquita RD, Lawrence GG, Lazoski C, Dotson EM, Abubucker S, Mitreva M, Randall-Maher J, Monteiro FA.
Infect Genet Evol. 2013 March;14(1):426-433.
The CDC hemophilia A mutation project (CHAMP) mutation list: a new online resource
Payne AB, Miller CH, Kelly FM, Soucie J, Hooper W. Hum Mutat. 2012 Dec 26.
Comparison of DNA extraction kits for detection of Burkholderia pseudomallei in spiked human whole blood using real-time PCR
Podnecky NL, Elrod MG, Newton BR, Dauphin LA, Shi J, Chawalchitiporn S, Baggett HC, Hoffmaster AR, Gee JE. PLoS One. 2013 ;8(2):e58032.
Poor immune responses of newborn rhesus macaques to measles virus DNA vaccines expressing the hemagglutinin and fusion glycoproteins
Polack FP, Lydy SL, Lee SH, Rota PA, Bellini WJ, Adams RJ, Robinson HL, Griffin DE. Clin Vaccine Immunol. 2013 Feb;20(2):205-10.
Narcolepsy as an adverse event following immunization: case definition and guidelines for data collection, analysis and presentation
Poli F, Overeem S, Lammers GJ, Plazzi G, Lecendreux M, Bassetti CL, Dauvilliers Y, Keene D, Khatami R, Li Y, Mayer G, Nohynek H, Pahud B, Paiva T, Partinen M, Scammell TE, Shimabukuro T, Sturkenboom M, van Dinther K, Wiznitzer M, Bonhoeffer J. Vaccine. 2013 Jan 30;31(6):994-1007.
Mutation of the dengue virus type 2 envelope protein heparan sulfate binding sites or the domain III lateral ridge blocks replication in Vero cells prior to membrane fusion
Roehrig JT, Butrapet S, Liss NM, Bennett SL, Luy BE, Childers T, Boroughs KL, Stovall JL, Calvert AE, Blair CD, Huang CY. Virology. 2013 Apr 6.
Genetic variation and exchange in Trypanosoma cruzi isolates from the United States
Roellig DM, Savage MY, Fujita AW, Barnabe C, Tibayrenc M, Steurer FJ, Yabsley MJ. PLoS One. 2013 ;8(2):e56198.
Surveillance of Parapoxvirus among ruminants in Virginia and Connecticut
Roess AA, McCollum AM, Gruszynski K, Zhao H, Davidson W, Lafon N, Engelmeyer T, Moyer B, Godfrey C, Kilpatrick H, Labonte A, Murphy J, Carroll DS, Li Y, Damon IK. Zoonoses Public Health. 2013 Feb 8.
Comparison of the sensitivity of laboratory diagnostic methods from a well-characterized outbreak of mumps in New York City, 2009
Rota JS, Rosen JB, Doll MK, McNall RJ, McGrew M, Williams N, Lopareva EN, Barskey AE, Punsalang A, Rota PA, Oleszko WR, Hickman CJ, Zimmerman CM, Bellini WJ.
Clin Vaccine Immunol. 2013 Jan 16.
Epidemiology of pneumococcal serotype 6A and 6C among invasive and carriage isolates from Alaska, 1986-2009
Rudolph K, Bruce M, Bruden D, Zulz T, Wenger J, Reasonover A, Harker-Jones M, Hurlburt D, Hennessy T. Diagn Microbiol Infect Dis. 2012 Dec 28.
Comparison of biochemical and molecular tests for detecting insecticide resistance due to insensitive acetylcholinesterase in Culex quinquefasciatus
Scott ML, McAllister JC. J Am Mosq Control Assoc. 2012 Dec;28(4):323-6.
Comparative effectiveness research in cancer genomics and precision medicine: current landscape and future prospects
Simonds NI, Khoury MJ, Schully SD, Armstrong K, Cohn WF, Fenstermacher DA, Ginsburg GS, Goddard KA, Knaus WA, Lyman GH, Ramsey SD, Xu J, Freedman AN. J Natl Cancer Inst. 2013 May 9.
Occurrence of beta-lactamase genes among non-Typhi Salmonella enterica isolated from humans, food animals, and retail meats in the United States and Canada
Sjolund-Karlsson M, Howie RL, Blickenstaff K, Boerlin P, Ball T, Chalmers G, Duval B, Haro J, Rickert R, Zhao S, Fedorka-Cray PJ, Whichard JM. Microb Drug Resist. 2013 Jan 5.
Genetic variability and the classification of hepatitis E virus
Smith DB, Purdy MA, Simmonds P. J Virol. 2013 Apr;87(8):4161-9.
Systematic analysis of multi-walled carbon nanotube-induced cellular signaling and gene expression in human small airway epithelial cells
Snyder-Talkington BN, Pacurari M, Dong C, Leonard SS, Schwegler-Berry D, Castranova V, Qian Y, Guo NL. Toxicol Sci. 2013 Feb 1.
Draft genome sequences of Bordetella holmesii strains from blood (F627) and nasopharynx (H558)
Tatti KM, Loparev VN, Ranganathanganakammal S, Changayil S, Frace M, Weil MR, Sammons S, Maccannell D, Mayer LW, Tondella ML. Genome Announc. 2013 ;1(2):e0005613.
"Drivers" of translational cancer epidemiology in the 21st century: needs and opportunities
Tram Kim Lam, Margaret Spitz, Sheri D. Schully, and Muin J. Khoury. 2013 Cancer Epidemiology, Biomarkers & Prevention Jan 15.
Improving the efficiency and relevance of evidence-based recommendations in the era of whole-genome sequencing: an EGAPP methods update
Veenstra DL, Piper M, Haddow JE, Pauker SG, Klein R, Richards CS, Tunis SR, Djulbegovic B, Marrone M, Lin JS, Berg AO, Calonge N. Genet Med. 2013 Jan;15(1):14-24.
Hepatitis E virus isolated from rabbits is genetically heterogeneous but with very similar antigenicity to human HEV
Wang S, Dong C, Dai X, Cheng X, Liang J, Dong M, Purdy MA, Meng J. J Med Virol. 2013 Apr;85(4):627-35.
Zoonotic Cryptosporidium species and Enterocytozoon bieneusi genotypes in HIV-positive patients on antiretroviral therapy
Wang L, Zhang H, Zhao X, Zhang L, Zhang G, Guo M, Liu L, Feng Y, Xiao L. J Clin Microbiol. 2013 Feb;51(2):557-63.
Cancer prevention for the next generation
White Mary C. , Lucy A. Peipins, Meg Watson, Katrina F. Trivers, Dawn M. Holman, , Juan L. Rodriguez Journal Adolescent Health, May 2013
Association of the Period3 clock gene length polymorphism with salivary cortisol secretion among police officers
Wirth M, Burch J, Violanti J, Burchfiel C, Fekedulegn D, Andrew M, Zhang H, Miller DB, Youngstedt SD, Hebert JR, Vena JE. Neuro Endocrinol Lett. 2013 ;34(1):27-37.
Is there evidence of the new variant Chlamydia trachomatis in the United States?
Won H, Ramachandran P, Steece R, Van Der Pol B, Moncada J, Schachter J, Gaydos C. Sex Transm Dis. 2013 May;40(5):352-3
Pneumococcal capsular switching: a historical perspective
Wyres KL, Lambertsen LM, Croucher NJ, McGee L, von Gottberg A, Linares J, Jacobs MR, Kristinsson KG, Beall BW, Klugman KP, Parkhill J, Hakenbeck R, Bentley SD, Brueggemann AB. J Infect Dis. 2013 Feb;207(3):439-49.
Inhibition of DNA-dependent protein kinase catalytic subunit by small molecule inhibitor NU7026 sensitizes human leukemic K562 cells to benzene metabolite-induced apoptosis
You H, Kong MM, Wang LP, Xiao X, Liao HL, Bi ZY, Yan H, Wang H, Wang CH, Ma Q, Liu YQ, Bi YY. J Huazhong Univ Sci Technolog Med Sci. 2013 Feb;33(1):43-50.
Survival among people with Down syndrome: a nationwide population-based study in Denmark
Zhu JL, Hasle H, Correa A, Schendel D, Friedman JM, Olsen J, Rasmussen SA. Genet Med. 2013 Jan;15(1):64-9.
Streptococcus pneumoniae serotype 12F in Alaska: insights from molecular characterization of isolates associated with rural community outbreaks
Zulz T, Wenger JD, Rudolph K, Robinson DA, Rakov AV, Bruden D, Singleton RJ, Bruce MG, Hennessy TW. J Clin Microbiol. 2013 Feb 13.
.png)
No hay comentarios:
Publicar un comentario