Putative Novel Genotype of Avian Hepatitis E Virus, Hungary, 2010 - Vol. 18 No. 8 - August 2012 - Emerging Infectious Disease journal - CDC
Viruses articles
Volume 18, Number 8–August 2012
Volume 18, Number 8—August 2012
Dispatch
Putative Novel Genotype of Avian Hepatitis E Virus, Hungary, 2010
Article Contents
Abstract
To explore the genetic diversity of avian hepatitis E virus strains, we characterized the near-complete genome of a strain detected in 2010 in Hungary, uncovering moderate genome sequence similarity with reference strains. Public health implications related to consumption of eggs or meat contaminated by avian hepatitis E virus, or to poultry handling, require thorough investigation.The aHEV is characterized by a small, nonenveloped virion and a 6.6-kb, capped, poly-A tailed single-stranded RNA genome. The genome encodes 3 open reading frames (ORFs). ORF1 is a polyprotein encoding putative functional domains of methyltransferase, papain-like cystein protease, helicase, and RNA polymerase. The capsid protein is encoded by ORF2; ORF3 encodes a multifunctional cytoskeleton-associated protein linked to viral morphogenesis and pathogenesis (1).
aHEV is ≈50% similar at the genomic level to mammalian HEV genotypes; recent proposals classify aHEV into a different taxon, possibly a new genus, within Hepeviridae. GenBank now includes 5 full or nearly complete aHEV genome sequences that could be classified into 1 of the 3 recognized aHEV genotypes. These 5 prototype strains with full or nearly complete genome sequences include a genotype 1 strain from Australia, 2 genotype 2 strains from the United States, and 2 genotype 3 strains from Europe and the People’s Republic of China (6,8–10). Additional putative genotypes have been identified through analysis of an ≈130-nt fragment of the helicase domain, suggesting that diversity within aHEV is higher than recognized (11). Our primary objective was the genetic characterization of an aHEV strain from the 2010 outbreak in Hungary to increase understanding of the origin and evolution of these emerging pathogens.
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